| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001538 |
|---|
| Symbol | |
|---|
| ID | 8559851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1738229 |
|---|
| End bp | 1741276 |
|---|
| Gene Length | 3048 bp |
|---|
| Protein Length | 1015 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646409208 |
|---|
| Product | Fe-S oxidoreductase |
|---|
| Protein accession | YP_003288686 |
|---|
| Protein GI | 262396833 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCTG CACTTCCGCT ACAGGTTTCC TCTGATCCTG TGGTTATCAA GTTCTTTAAC
ACCCTTAAAC AACTTGGTTT CAAGGGGGAT ACTGATGCTC GTTATACCAC TCGATTGAGT
ATGGCGACTG ACAACAGCGT CTACCAGCAA CTTCCTTTGT CGGTCGTCTT TCCTGCCAAC
CATCATGATG TGGTAATACT TGGCAAGGTC AGTGCACGTG ATGAATTTAA GCACCTGACC
TTTTCGCCCA GAGGAGGCGG AACGGGCACC AACGGACAAT CATTGAACTC GGGGATCGTG
GTTGATCTGT CTCGCTACAT GAATCGAGTG TTAGAGATTA ACGAGCAGGA AGGCTGGGTG
AGAGTGGAAA CTGGGATAGT CAAAGATCAA CTCAACGACA TCGTTCGCCC TTATGGTTAT
TTCTTCTCGC CAGATCTGTC GACCAGCAAC CGCGCAACAT TAGGTGGGAT GATTAATACC
GATGCATCAG GCCAAGGCTC TTTGCAATAT GGTAAAACCT CGGATCATGT GTTGGCGCTC
AAAGCCGTAT TGGCGGATGG TTCGGTGCTC GATACCGAAG CAATTCAACA AAACAAATGG
TTAAACAGTG ATGTAGTATC GCGAGCGTTA AAAATTACGG AGGAAGTTTG TCGAGACAAG
CGTCAACAGA TTCTGGATAA GTTTCCTCCT CTGAATCGAT TTCTTACTGG TTATGACCTA
AAAAATGCCA TAAACGACAA GAGTGAAGAG TTTGACGTCA CGAGAATATT ATGTGGCTCT
GAAGGTACGT TAGCTTTTAT CACTGAAGCC AAGCTCAATC TTACGCGAAT ACCTACCACG
CGACGGTTAG TGAACGTTAA ATACGATAGC TTTGATTCTG CATTGCGAAA TGCTCCCTTG
ATGGTCGCAG CAGAGGCGCT ATCGGTAGAG ACGGTTGATG CAAAGGTGCT TAATCTTGCA
AGAGAAGACA TTGTCTGGCA CTCGGTAAAA CACGCGATCT CAGATGTGCA GGGCAAAGAG
ATGCAAGGGA TTAACTTTGT CGAGTTCGCA GGCAGTCACA ACGATGATAT TGAGGATAAA
GTTGAACGCT TACTTTCAAT TCTCGATAAA GAAATGGCTC ACCGCCGCAG TGGTATCATC
GGTTATCAAG TCTGTCGTGA ACCCCAAGAC ATCCAGGCTA TTTATGGAAT GCGCAAGAAA
GCGGTTGGGC TGCTTGGCGC GACCAAAGGT CAGGCAAAGC CGATTGCATT CGCGGAAGAT
ACCTGTGTGC CGCCTGAAAA TTTGGCGGAC TTTATCGCGG AATTTCGTAC GTTGCTAGAC
AGCAATAACC TGCATTATGG CATGTTTGGG CATGTGGATG CTGGCGTCCT TCACGTGCGT
CCGGCGCTCG ATATGTGTGA CCTTGGGCAA GAAGCGTTGA TGCATCAACT ATCCGATGAT
GTGGTCGCGC TGGTGGCAAA ATACAATGGT TTAATGTGGG GAGAGCACGG TAAAGGATAT
CGTTCAGAAT ATGGACCTGC CTTCTTTGGT GATGAGCTCT TTACTGAATT AAGGCGCATT
AAAGCGGCGT TTGACCCCGA CAATAAAATG AACCCGGGCA AGATTTGCAC GCCACTGAAT
AGCGACGCTG AAATGGTAAA AGTCACAGCG ACCAAGCGTG GCTACTATGA TCGTCAGATC
CCCGTAGAAG TCCGAGAGTC GCTTAAGCCC GTGCTGTCTT GCAATGGCAA TGGGCTGTGT
TTTAATTACG ATGCTGATAG CCCAATGTGT CCATCATTTA AAGTAACAGC CGATCGTCGC
CACTCTCCGA AAGGGAGGGC TGGGATAATG CGTGAATGGC TGCGTCGCCT TAATGACAGT
GGCTTCGATT TGCTCGCTAA CGAACAACAG CTTCTCAATC AAACGTTATC GGTTAAGCTT
TTGGCTCAGA AGCTGAGTCA ACTGATATCT CGCCCCACAT CTGATGACCT ATCGCATGAA
GTTTATGAGG TGATGAATGG CTGTCTAGCG TGCAAAGCGT GTGCGAGTCA GTGCCCTGTT
AAAGTTGATG TGCCTGATTT TAGAGCGCGT TTTTTACACC TCTATCACTC ACGTTATCGC
AGACCTCTGC GCGACTATCT GGTGTCGAAT ATTGAGCAAC TGCTGCCGAT TATGGCAAAA
GCCCCCAAGC TGGTTAATCA AATTGCATCT ACTCGGCCCG TTACGCAGGT ATTAGAGACA
TCCATCGGTT TTATTGATTC GCCAGTGCTA TCTATCCCTA CGTTGCAAAA TCGATGTCAG
GCACTTGGCG TGAGCCCGTT TGACTTTGCG TATCTAGAAT CGCTTTCCCC AGAAGTGAAG
CAAAATTACG TCTTGATTGT TCAAGATCCA TTTACCAGCT TTTATGAAGC CGAGTTGGTT
GCGGACTTTA TTCAGTTATT GCAGCGGTTA GGGAAACACC CTGTTGTTCT GCCTTTCAAA
CCTAATGGGA AAGCTCAACA TGTAAAAGGT TTCCTTAAGG CATTCGCCAG AAATGCACAA
AACACTTCGG ATTTTCTCAA CCAAGTTGCT GAGCTTGAAA TTCCTATGAT CGGTATCGAT
GCTGCCTTAG TGCTTTGTTA TCGTGATGAA TACCATCAGG TTCTAAAAGA AAAGCGGGGC
GAATTTACAG TTTATACGGC TCATGAATGG CTGGTGGATA CACTCAATGA ATGGCCAGTT
GTACGCGCAT CGGATGAAGA GCCTTGGTAT TTGATGGCGC ATTGCACAGA AAAGACCAAA
ATACCGCAGA CTGAGAAATC TTGGCAGTCT ATTTTTCATC ACTTTGGCTT AAAACTGCAT
GTGATACCTG CGGGATGTTG CGGTATGGCA GGGACATTCG GCCATGAAGT GGATAAGAAA
AGTACGTCTG AAGCTATTTA TCAACTGAGT TGGAAACCGA ATATAAAGAA CCTGCCCACT
GAGCGTGTGT TAGCCACGGG GTACTCCTGC CGCAGTCAAG TTAAGCGTTT TGAAGGGGAG
GTCGTTCGAC ATCCGGTCCA AATTTTAGCC AGTTTGTTTA GTGCATAA
|
|---|
| Protein sequence | MLPALPLQVS SDPVVIKFFN TLKQLGFKGD TDARYTTRLS MATDNSVYQQ LPLSVVFPAN
HHDVVILGKV SARDEFKHLT FSPRGGGTGT NGQSLNSGIV VDLSRYMNRV LEINEQEGWV
RVETGIVKDQ LNDIVRPYGY FFSPDLSTSN RATLGGMINT DASGQGSLQY GKTSDHVLAL
KAVLADGSVL DTEAIQQNKW LNSDVVSRAL KITEEVCRDK RQQILDKFPP LNRFLTGYDL
KNAINDKSEE FDVTRILCGS EGTLAFITEA KLNLTRIPTT RRLVNVKYDS FDSALRNAPL
MVAAEALSVE TVDAKVLNLA REDIVWHSVK HAISDVQGKE MQGINFVEFA GSHNDDIEDK
VERLLSILDK EMAHRRSGII GYQVCREPQD IQAIYGMRKK AVGLLGATKG QAKPIAFAED
TCVPPENLAD FIAEFRTLLD SNNLHYGMFG HVDAGVLHVR PALDMCDLGQ EALMHQLSDD
VVALVAKYNG LMWGEHGKGY RSEYGPAFFG DELFTELRRI KAAFDPDNKM NPGKICTPLN
SDAEMVKVTA TKRGYYDRQI PVEVRESLKP VLSCNGNGLC FNYDADSPMC PSFKVTADRR
HSPKGRAGIM REWLRRLNDS GFDLLANEQQ LLNQTLSVKL LAQKLSQLIS RPTSDDLSHE
VYEVMNGCLA CKACASQCPV KVDVPDFRAR FLHLYHSRYR RPLRDYLVSN IEQLLPIMAK
APKLVNQIAS TRPVTQVLET SIGFIDSPVL SIPTLQNRCQ ALGVSPFDFA YLESLSPEVK
QNYVLIVQDP FTSFYEAELV ADFIQLLQRL GKHPVVLPFK PNGKAQHVKG FLKAFARNAQ
NTSDFLNQVA ELEIPMIGID AALVLCYRDE YHQVLKEKRG EFTVYTAHEW LVDTLNEWPV
VRASDEEPWY LMAHCTEKTK IPQTEKSWQS IFHHFGLKLH VIPAGCCGMA GTFGHEVDKK
STSEAIYQLS WKPNIKNLPT ERVLATGYSC RSQVKRFEGE VVRHPVQILA SLFSA
|
|---|
| |