| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001523 |
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| Symbol | |
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| ID | 8559836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1719190 |
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| End bp | 1719999 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409193 |
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| Product | putative AraC-type regulatory protein |
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| Protein accession | YP_003288671 |
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| Protein GI | 262396818 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000205553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACA TTGAGATCAT TCGCTTTAAT CACTTCACTG CGCGCAAAAG TGAGCGTTAC
ACCGCAACAC ATAATGGCTT ATATGTTGTG GAAGAAGGTG CCCTATTAGT TCATCAACCA
AATGGTGAAC AGTTTGAACT TAAAGCAGGA GATTTTACTC TCTACAACTC CGCTGATTTG
AGCAGCGCAG AAGCTATCCC TAGTGAAAAA GGCTTTAAAG CACTGGCCCT AGTCTTCAAC
CCAAATCTAT TCTGTGACTT TAAAAAAGCA CACCCAATGC TACGCTCCAA GACGGAAGAA
AGGCGCTTCT ATCCTTTTTC AGCGCAAGCC AGCAGCGAAG TAGCACAACT AAAAGACACA
TTGGTCAACT TAGCGAGTCG CAATGCTCCA GACTACACAC AAGGTCATAT CGCAATGGCA
CTGCTGTCGT TAATGGTGGA GGTAGAGCCA AACATCCTAT CAATCATAGA TGATGCAAGC
AGCCTAAGCG ACTCTCAAAA GGCCATCAAG TATATTGAGA ACAATATCGA GAAAGATATC
ACTCTGGAAG GCTTAGCGGC TCATATGAGC ATGTCTATCG CGACCTTAAA ACGCCGCCTC
GCCGCAGAGG ATCTTTCATT TTCACAGATA TTAAAAGTGA AGCGGATCAA CTTCGCCGCA
ACCCAGCTGC GCATGTCAGA AAAATCTATA ACAGAAATAG CGTTTGAATC CGGATTTAAA
AGTGCAGCGC ATTTCAGTAC CGCATTTAAA TCGGTTTACA ACATGACGCC GAAAGACTTT
AGAAACCAAG TCGTTAAATC CAAAGCATAA
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| Protein sequence | MPNIEIIRFN HFTARKSERY TATHNGLYVV EEGALLVHQP NGEQFELKAG DFTLYNSADL
SSAEAIPSEK GFKALALVFN PNLFCDFKKA HPMLRSKTEE RRFYPFSAQA SSEVAQLKDT
LVNLASRNAP DYTQGHIAMA LLSLMVEVEP NILSIIDDAS SLSDSQKAIK YIENNIEKDI
TLEGLAAHMS MSIATLKRRL AAEDLSFSQI LKVKRINFAA TQLRMSEKSI TEIAFESGFK
SAAHFSTAFK SVYNMTPKDF RNQVVKSKA
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