| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001515 |
|---|
| Symbol | |
|---|
| ID | 8559827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1711753 |
|---|
| End bp | 1713657 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 646409184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288663 |
|---|
| Protein GI | 262396810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.431863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA TCTATCCTTC CTGGAGCAAT ATTGAAAGAC TAACTGTTAA ACCAACTGAA
GGTGAACTGT ATCTCCTGAA AAAAATAGAT GAAAGTCTTG ATGAATCATA TGAGGTGTTT
TTTAACCCAT TTCTTGATGG AGACAGACCT GACATAGTTA TCGTAAAAAG AGACTATGGG
GCTATTATTA TAGAGGTTAA AGATTGGTCA ATTAATAACT ATGTAGTAAC AAAGGACAAC
AAGTGGTTAA TCAAAGATAG CGTCATTCGC TCACCTCAAA CACAAGTTTT CAGATACAAA
CAGAATATGT TTGAATTGCA CCTCCCTATT TTAGGCTTAA AGGAGCTAGT AAATAGAAAC
TTTTATAATG TAATTAGTAC GTATGTATAT TTTAACTGCG CAAGCAAGTT AGAAATTAGA
GAGCTATACC AAACTCCAGA AAATGAAGTA AGAATGGAGT TGAATTTACT AAATGCTTCT
ATAAAGAATC GAGAGATAGT TCATTTCGAG TATGATAAAA AACAAAAGTA TTTGAGTAAT
AAGATAAAAC AAATTTCTCG TGACGCTTAC ATCTCTTATG GTAAAGATAA TATTAATGAT
CTTGTATCTA AAATAAAGAG AATGAGGAAG AATAATCTTT TTACGAATAA CATATATCTT
GACTTCATCC GTAGGTTATC TCCTCCTACT CACATTTTAG ATCAAGGTTT ACCTATAGTA
TTTGATAGAA AGCAAGAATC TCTAATTAAT AGCGTATCTG AAAAACGTAA GGTAAAAGGG
GTGGCTGGTT GTGGAAAAAC TTCAATTCTC GCAAAACGAG CGATAAGTGC CTTTGAACGG
CATGGTAGTG AAGTTTTAAT TCTCACATAC AACATTACTT TAAGGCATTA CATTCGCGAT
AAGATTTCGC AGATTCAATG CAAAGGAGCA GGTAATCAGT TTGAAATCAT GCATTATCAT
GGTTTTATCA ATAATAAACT AAATGAGTAT GGTTTAGATG TAGCTCCGTT GTTAGAAAAA
TACCAAGGCA CAGATAAAGA GAAGCTTGAA AAACTGTATA AGGATCGAAA CTTATTTGAG
TCTTTACCTA TAAATGAAAA ATATAAGACA ATATTTATTG ATGAGGTTCA AGATTATGAA
CCAGATTGGA TAAAGATTAT TCGAGATTGC TTCCTTGAAC CTAATGGTGA AATGATTTTA
TTTGGTGATC AATCTCAAAA TATTTATGAG CGTGATGATA ATAAAAGAGA GTCAGCGTTA
GTACAAGGCT TCGGACGTTG GTTTAAGTTG AGTAAATCTT ATCGATCAGA AATCGATACG
CCTTTGATTC AGCTTTTCAA AGGCTTCCAG GAAGAGTTTC TGGTAAGTAA ATATAGTGAT
GTATTTGAAT CGAATTATAC CCAAGGAAGT ATGAACTTTG ACTTACTAGC ATATGAATCT
TATGGTTCGA TTATTAATAC AGAGAAGGTT ATTGACTTGA TCAACTCTTA TGTAAAAGAG
AAGAGTATAA ATCCAAATGA TATAGCAATA ATATGTTCTA AGGTTGAACC TCTTATTGCC
ATCGAAAAGA AAATACGAAG TATTGAAAAA ACTAAAATTA TGTTTGAGGA TGCAGATGAT
TTAAGGCAGA TTGAACATAT TACAGGAAAG GAACGTGTCA ATAGAATAGA AAAAATCAGA
AGAAGGAAGA AATGCTTTTT CATGCAGAAC TCTGGCGTTA TAAAAATGTC TACTACCCAT
AGTTTCAAGG GGTTGGAGTC TGATACAGTG TTTTGCATTT TGTTAAATGA TGATCACGAA
GAAATGGTAT ATACAGGTAT AACTAGAGCA AGGAAAAATT TGGTTACTTT TGATTGCTAT
GATAGTAAAT ATAAAGGATT TTTCAGTAGA AATATAAAAC CGTGA
|
|---|
| Protein sequence | MAKIYPSWSN IERLTVKPTE GELYLLKKID ESLDESYEVF FNPFLDGDRP DIVIVKRDYG
AIIIEVKDWS INNYVVTKDN KWLIKDSVIR SPQTQVFRYK QNMFELHLPI LGLKELVNRN
FYNVISTYVY FNCASKLEIR ELYQTPENEV RMELNLLNAS IKNREIVHFE YDKKQKYLSN
KIKQISRDAY ISYGKDNIND LVSKIKRMRK NNLFTNNIYL DFIRRLSPPT HILDQGLPIV
FDRKQESLIN SVSEKRKVKG VAGCGKTSIL AKRAISAFER HGSEVLILTY NITLRHYIRD
KISQIQCKGA GNQFEIMHYH GFINNKLNEY GLDVAPLLEK YQGTDKEKLE KLYKDRNLFE
SLPINEKYKT IFIDEVQDYE PDWIKIIRDC FLEPNGEMIL FGDQSQNIYE RDDNKRESAL
VQGFGRWFKL SKSYRSEIDT PLIQLFKGFQ EEFLVSKYSD VFESNYTQGS MNFDLLAYES
YGSIINTEKV IDLINSYVKE KSINPNDIAI ICSKVEPLIA IEKKIRSIEK TKIMFEDADD
LRQIEHITGK ERVNRIEKIR RRKKCFFMQN SGVIKMSTTH SFKGLESDTV FCILLNDDHE
EMVYTGITRA RKNLVTFDCY DSKYKGFFSR NIKP
|
|---|
| |