| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001506 |
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| Symbol | |
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| ID | 8559818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1698509 |
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| End bp | 1699801 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409175 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_003288654 |
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| Protein GI | 262396801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000291883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTT CATCTCAAGG TTTTGCGCCA GAAGTGGTTA AAGCACTGGC AGAATGCGGT
TATGAAAAGT TAACGCCAAT TCAACAGAAG GCGATTCCAA TGGCTCGCAA AGGCCATGAT
ATTTTCGCTA CAGCACAAAC AGGTACTGGT AAAACGGCTG CGTTTTCTCT GCCTATGATT
CAGCAGTTGT TAGACAGTAA CCGTAGCGCT TCTCGTAAGA CTGCTCGTGC ACTTATCTTG
GCTCCAACTC GCGAGCTTGC TGAACAAATT GCTGACAACA TCAAAGCTTA CACGAAGTAC
ACCAATCTGT CGGTGGCGGC GATTTTCGGT GGTCGTAAAA TGTCTTCTCA GGTTGCGGCA
CTGGAAAATG GTGTTGATAT CCTTGTGGCT ACACCTGGTC GATTGGAAGA ACACATCGAA
CAAGGTAATG TCTCGGTGGC ACACTTAGAG TTTTTGGTGT TTGATGAAGC AGACCGTATC
TTGGATATGG GCTTTATTCA TGCAGTTCGT AAGATCATGC TGGATGTGGA TACAGATCCG
CAAATCATGA TGTTTTCGGC AACGACTTCA AGCCAGCTAA ATCTGTTAGC GAAAGACATT
CTGCGTAAAC CAAAACGTAT CGAAGTAGAG CGTGCAAATA CTACGGCACA AACAGTTGCT
CACGTGCTAT ATCCAGTTGA TCAAGAGCGA AAAACGGAAC TGCTTTCAGA GCTAATTGGT
CGCAAAAACT GGAAACAAGT GTTGGTATTT GTGAACTACA AAGAGACCGC AAACGAAGTG
GTAAAAGAGC TGAAACTTGA TGGTATCAAA GCGGTGGTTT GTCATGGTGA CCGTGCTCAA
AGTGCTCGTC GTCGTGCGCT AGAAGAGTTT AAGTCCGGTA AAGCACGTGT CATGGTGGCT
ACCGATGTCG CTGCTCGAGG TCTAGATATT GAAGACTTAC CTCACGTTGT GAACTATGAC
ATGCCTTTCC TAGCGGAAGA TTACGTTCAC CGAATTGGTC GTACGGGCCG TGCAGGTAAA
CAAGGTCATG CTGTTTCATT TGTAAACCGA GATGAAGAGC TCACGGTGGT TCAGGTTGAA
AATCTAATCC AGCAACGCAT TCGCCGTATT GAGCTTGCAG GCTATGAACC AAAACAGCGT
GAATCTTACA TTGAAAAGCT GCACTCAAAA CCAGCATTCA AGAATCGTCA AGGTCGTCGT
AATAATCCGA ACCAGTCAGC AACAGACCAA GGGTCGGCAG AGCGTCGTCT TGCTATGGTG
AAGCGCCTGA AAGCGCGTCG TGGCGCAAAG TAA
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| Protein sequence | MSFSSQGFAP EVVKALAECG YEKLTPIQQK AIPMARKGHD IFATAQTGTG KTAAFSLPMI
QQLLDSNRSA SRKTARALIL APTRELAEQI ADNIKAYTKY TNLSVAAIFG GRKMSSQVAA
LENGVDILVA TPGRLEEHIE QGNVSVAHLE FLVFDEADRI LDMGFIHAVR KIMLDVDTDP
QIMMFSATTS SQLNLLAKDI LRKPKRIEVE RANTTAQTVA HVLYPVDQER KTELLSELIG
RKNWKQVLVF VNYKETANEV VKELKLDGIK AVVCHGDRAQ SARRRALEEF KSGKARVMVA
TDVAARGLDI EDLPHVVNYD MPFLAEDYVH RIGRTGRAGK QGHAVSFVNR DEELTVVQVE
NLIQQRIRRI ELAGYEPKQR ESYIEKLHSK PAFKNRQGRR NNPNQSATDQ GSAERRLAMV
KRLKARRGAK
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