| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001496 |
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| Symbol | |
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| ID | 8559808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1687012 |
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| End bp | 1688262 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409165 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_003288644 |
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| Protein GI | 262396791 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.16101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA AAACACAGCA AGCGACATTT GCCGATCTTG GCCTGATTCC AACCTTAGTC
GAGCGACTAG AAGCGTTAGA ATACAGCCAA CCGACGCCCA TTCAATCTCA TACCATTCCT
TATATCCTTG AAGGGAAAGA TATTGTTGGC GGTGCCAATA CGGGCTCTGG TAAAACCGCT
GCTTTTTCGC TGCCAATTCT GCAAAAAATT GTTCAGCAAG ACGAAACAAA TCATCGCCGT
GGTAACTTCG TTTCTCACCT GATTTTAGTT CCAACTCGTG AGCTGGCATC ACAGGTGGCA
TATAACGTCA AATCTTACTC ATACCATCTT AGAGATAAGA TCAAAACGGT TGCCGTATTT
GGTGGTGTGT CGGTGAACCC ACAAATGCTG GCGCTTCGCG GTGGCTGTGA CATTATCGTA
GCTACGCCAG GTCGATTACT TGATCTGGTA TCCAGTAACG CGATTAAGTT GGACCAAGTA
AAAACGCTCG TGCTCGATGA AGCTGACCGT ATGTTGAGCC TCGGATTTAC CGAAGAACTC
AATAAGATTC TTGCGTTACT GCCAGAGAAG AAACAGACGC TGCTATTTTC TGCTACTTTC
CCTGATAAAG TCACGACGCT GTCTCAGCAC TTGCTCCGTG ACCCTGTTGA AGTTCAGTTG
CAGAGCGCAG AAGCCAGCAC TTTGGTGCAA CGCGTGTTTA GTGTAAATAA AGGTGAGAAA
ACGGCGGTAC TCGCGCACTT AATCAAACAG CATCAGTGGC GACAGACTTT GATTTTTGTG
AATGCTAAGA ATGCCTGCAA CCATTTAGCT CAAAAGCTGT CAAAACGCGG TATTACTGCT
GAAGTTTTCC ATGGTGATAA AGGGCAGGGC GCTCGTACTC GTGTACTTGA CGGTTTTAAG
TCTGGCGAGA TTCAAGTTCT TATTGCTACC GATATCGCAG CGCGTGGCCT TGATATTGAA
AAGCTGCCAG TGGTGATTAA CTTCGATCTT CCACGTAGTC CTGCTGACTA TATGCATCGA
ATCGGTCGTA GTGGTCGTGC TGGTGAAGTG GGTCTAGGGT TATCTCTTAT CGATTACGAT
GACTATCACC ATTTCAAAGT GATAGAAAAG AAAAATAAGT TCCAACTTGA ACGTGAGCAG
GTAGAGGGCT TTGAAGTGGA AGACGACCAA AGTGAAGCCT ACTTTTTACC GATGAAGCCG
CGTGCAAAGC CAGCAGGTAC AGGGAAAAAG AAGAAAAAGC GTAATCAATA G
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| Protein sequence | MTDKTQQATF ADLGLIPTLV ERLEALEYSQ PTPIQSHTIP YILEGKDIVG GANTGSGKTA
AFSLPILQKI VQQDETNHRR GNFVSHLILV PTRELASQVA YNVKSYSYHL RDKIKTVAVF
GGVSVNPQML ALRGGCDIIV ATPGRLLDLV SSNAIKLDQV KTLVLDEADR MLSLGFTEEL
NKILALLPEK KQTLLFSATF PDKVTTLSQH LLRDPVEVQL QSAEASTLVQ RVFSVNKGEK
TAVLAHLIKQ HQWRQTLIFV NAKNACNHLA QKLSKRGITA EVFHGDKGQG ARTRVLDGFK
SGEIQVLIAT DIAARGLDIE KLPVVINFDL PRSPADYMHR IGRSGRAGEV GLGLSLIDYD
DYHHFKVIEK KNKFQLEREQ VEGFEVEDDQ SEAYFLPMKP RAKPAGTGKK KKKRNQ
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