| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001494 |
|---|
| Symbol | |
|---|
| ID | 8559806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1685107 |
|---|
| End bp | 1685913 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646409163 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288642 |
|---|
| Protein GI | 262396789 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.696729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC CTATCTTTAT TATCTATTAC ATTACAGCAG GCTTGGGCAT TGGCTTTCTC
GCTGGACTCG TTGGTGTTGG TGGTGGTGGA ATGGCCGTCC CTATTTTTGC GTTTCTGTTT
TCACTACAGG GAATAGCTGA TACAGAAGTG GTCCATCTTG CGTTAGGGAC ATCAATGGCT
TCAATGATTA TTACAACATT GGGCAGCATG CGCGCTCACT ACAAAAAAGA GAATGTAGAC
TCGACAATGG TAGTAAAAAT GTTGAGCGGA GTTCTAGTCG GAACATTTTG CGCCACATTC
GTAGCATCGT ATCTACAGGG AATCTATCTG GCAGGTTTTT TCAGCGTATT CATGTTGTAT
GTAGCTTATA AGATGTTTCT CAACACTGAA AATGAGTACA ACCCTAACCC ACATGGGGCT
ATCGGTAATA TCACTGTAGG CTCTGTGATT GGCTCTGTAT CAGCACTTGT CTCTATAAGC
GGTGCGGGGT TGATCATCCC CTATCTTGTC CAGCAAAATT TTGAGGTAAA ACGAGCTATT
GGCACCTCTG CTGCGATAGG TTTCCCTATC GCGCTATCAG GAAGCCTCGG TTACATGTTA
AACGGATGGG AAAATACAGA TTGGAACAAC TTAGTATTAG GATACATATA CCTTCCTGCA
ATGATCAGCT TCTCCATTAG CAGCTACTTA ACTACTAGCC TCGGCGTGCG TTGCGCAGAG
TATTTCCCAA ATAAAGTTCT TAAGAAAATC GTTGGTATTT TGTGTGTTCT TCTGAGTTTT
AAAATGCTGG TACAAGTACT TAATTAA
|
|---|
| Protein sequence | MNEPIFIIYY ITAGLGIGFL AGLVGVGGGG MAVPIFAFLF SLQGIADTEV VHLALGTSMA
SMIITTLGSM RAHYKKENVD STMVVKMLSG VLVGTFCATF VASYLQGIYL AGFFSVFMLY
VAYKMFLNTE NEYNPNPHGA IGNITVGSVI GSVSALVSIS GAGLIIPYLV QQNFEVKRAI
GTSAAIGFPI ALSGSLGYML NGWENTDWNN LVLGYIYLPA MISFSISSYL TTSLGVRCAE
YFPNKVLKKI VGILCVLLSF KMLVQVLN
|
|---|
| |