Gene VEA_001491 details

Gene Information

• Locus tag: VEA_001491
• ID: 8559803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1678852
• End bp: 1680897
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 646409160
• Product: pyocin R2_PP tail formation
• Protein accession: YP_003288639
• Protein GI: 262396786

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.461631
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAGAA TACAGTTGCC TAAAAATGCT CTAACAAGGG TGAAAATGGG TCAATCGTTT 
GCTGAATATG ATCTAATCAG ATCTGATCCC CATCTATTCG TTACTACACC TGCGACGGTA 
AGTTCTATGG ATCAAGAAGG AACTAACTGT TTTTACATCG GGAGACGAGG TGCAGGTAAA 
ACCGCTATCA CTTATGAAGT GCAGCGCAAG TTTCCCAGAA CAGTACACAT TACACCACAA 
ATTTTTGATT TAATCGCTTT ACCTTTAGAG CATGATGAAT TTATAGATAC TAGGCAAAGG 
CCATTTAAGT CACTAATGCA TTCTATGGAG AGGGCATTGG TAGATGAAGT CATAAAAGCA 
TGGGTTGATA GAGGAATTTT TAAATTTGAT AAATCGTTCG ATTCAATAAG GCGTGAACGA 
GGTCTTATTG AAGACTGTGA TTTTGATTTA CGTGTTCTTA ATCTTACCGA AGAAATATTT 
GACGCATTTT CAAAAGAGAA TGACAAACTA TGGCTGCGCC AAGTAAAAAG AAGTAAAGAA 
ATAGTAAAAG AAGCTAATGC GGTGTCGACG GGAGGAGGGT ATGACTTTAT TTTATTAATC 
GATAGGCTAG ATGAGTCATG GGATGGTTCA GATTCAGCAA TTATTTGTCT CATGGCCATG 
ATGCATGCAG CTGTTCGCTT AAGAGCCTCA ACAAACTTTC TTCGCCCTTA TATTTTCATC 
AGAGAGAATA TCTATGACCG AATTAGAACA ATTGACAATG AATTTTCTAG ACTAGAAACT 
TCTTCCGTTT TTTTAGAATG GTCATCAATA AAGTTAACTG AATTAGTTGA AAGAAGATTA 
GTTAAGCCTT TTAGCACAAA ACCAAAGTTA GGAGGAGAAG CATGGAGCTA CTTCTTTGAA 
GAAGATGAAA ATGGATCATC CGTTGATCAC GTAATGAAAT TGTGTCAGCA CAGACCACGC 
GATGTACTCA TGCTTACAAG CTATGCTATA GATAATGCGA TAAAAAATGG TAATAATAAA 
GTAGCCCCCA AGGACTTAAC CGATGCTTCA GTAAGATATA GTACAAGTAG ATTAAAAGAT 
CTAGGCGATG AATATGCTGA AAACTTCCCA AACATCAGCT TAATATTAGA GTATTTTTAC 
GGACTCGGTA ACCAATACAC AGTCAACTCA ATCGAAGACT TTATACAGAA GATACTTGTT 
AATGAATCAA TAGCTAAATA TTGTAGTGAT TGGCTCTATA AACAGACTAC TCCATATAGG 
TTTATTGAGC TCCTGTTTGG TATCGGCTTT ATCGGCATTC AGAGAAAAAA CCATGTTCAA 
TATAAGGAAT CAGGTAAAGA TTTGAATGCT AAACCAGCAT TTGATAATAA TTCAATATTT 
GAAGTACATC CTACTTATCA TCAAGCTTTG AACCTTAGAA ACGTATTAAT AACAGACCTT 
TCAGATGGAA CAATACTTAA GAATGAAGGG ATACTAGAGG ACTTACCTGA GAATTTTCAA 
CTTGATGACT ATAAGATGAT CTTAGAAGAC ACTTTATCAA AATTGAAATT TTTACCAAAA 
GGTCATGAAG GTGCAAAAGA CTTCGAAGAC ATCGTCGGGA AAATTATAGA ATTATGCTTT 
TTTAGATCAC TAAATAATGT CCAACCCACT GAGCGGACAA ATGATGGTTC AACGATAAGG 
GACTGGGTTG CCTCAAACAG AGCTTCAGGT GGCTTCTGGG AAATGATAAG GAATAAATAT 
GGGGCAACTC AAGTCGTTTG GGAATGCAAA AACTATGATA ACCTGAAGTC GGATGATTTC 
CACCAAATTC AATACTACCT AAATGATACT TTTGGCCGTT TCGGAATTAT TGTGTTCCGA 
GGTGATGAAG TAAAAGATTC ACACATTAAG CATATTTCTA ATATAGCAAA TAAGAACAAA 
GCTGGATTAG TAATGGTTCT TACCCAAAAA GATCTCGAAG TATTCCTCCG ACAATCAATT 
AAAGGGGCAT TTAAAGAAAG TCATATACAA GACAAATATG ACAATCTTAT TCGAAAAATA 
TCATGA 

 

Protein sequence

MTRIQLPKNA LTRVKMGQSF AEYDLIRSDP HLFVTTPATV SSMDQEGTNC FYIGRRGAGK 
TAITYEVQRK FPRTVHITPQ IFDLIALPLE HDEFIDTRQR PFKSLMHSME RALVDEVIKA 
WVDRGIFKFD KSFDSIRRER GLIEDCDFDL RVLNLTEEIF DAFSKENDKL WLRQVKRSKE 
IVKEANAVST GGGYDFILLI DRLDESWDGS DSAIICLMAM MHAAVRLRAS TNFLRPYIFI 
RENIYDRIRT IDNEFSRLET SSVFLEWSSI KLTELVERRL VKPFSTKPKL GGEAWSYFFE 
EDENGSSVDH VMKLCQHRPR DVLMLTSYAI DNAIKNGNNK VAPKDLTDAS VRYSTSRLKD 
LGDEYAENFP NISLILEYFY GLGNQYTVNS IEDFIQKILV NESIAKYCSD WLYKQTTPYR 
FIELLFGIGF IGIQRKNHVQ YKESGKDLNA KPAFDNNSIF EVHPTYHQAL NLRNVLITDL 
SDGTILKNEG ILEDLPENFQ LDDYKMILED TLSKLKFLPK GHEGAKDFED IVGKIIELCF 
FRSLNNVQPT ERTNDGSTIR DWVASNRASG GFWEMIRNKY GATQVVWECK NYDNLKSDDF 
HQIQYYLNDT FGRFGIIVFR GDEVKDSHIK HISNIANKNK AGLVMVLTQK DLEVFLRQSI 
KGAFKESHIQ DKYDNLIRKI S