| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001462 |
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| Symbol | |
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| ID | 8559774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1649106 |
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| End bp | 1650461 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409131 |
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| Product | extracellular solute-binding protein family 3/GGDEF domain protein |
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| Protein accession | YP_003288610 |
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| Protein GI | 262396757 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTATG CGCACAAGTC AGAGTCTCAT TCTTTAATAG TTGCTAACTC CAAAGCTTGG
AAGCCATTCT CTTACCTTAG CCCAGACGGT GAACCCAAAG GCATTTTGAT CGACTTCTGG
AAAGCGTATG CGGCGGACAA CCAAATTGAT GTTCAGTTTC TGCTTCTTGA TTGGGAGGCT
TCTTTACAGG CCGTAAAAGA GGGGCGTGCT GACTTTCACG CGGGATTAGT TTACTCATCG
GAAAGAGCCG ATTACTTGGA TTTTGGCGCA GTTATCATGC CCATTCAAAC CAAATTATAT
GTCAATCAAG ACGTGCTTTC GATTGATGTC AAAAGTGTTT TAGCTGGTGA AATGACGTTG
CCAATTGGTG TCGTTAAAGG AAGTTACGAG TCTGAGTTTA TTAAGACGAA TTATCCTAAT
GCGCCTATTG CAGAGTACAT TAATAACGAC ACGATGATAC AGGCCGCTGT CGCTAAGAAG
GTGCTGTATT TTGTCGCGGA CCTTCAAGTT GCTAACTTTT ATATGGCAAC TATGCCGGGA
GCAGGCATGT TTGTTCCTGT AATAAATTTA TATAGTAAGG ACCTTCGGAT TGCAGCAGGG
TTGCATAGTT CTTCTTCCAT TTTGGATGTC TCTCGAGCGT TTGAAAAAGT TATCGATACA
GATCGAGAAA GAATCCTCAA TCGGTGGAGT GTGGTGAAAA CGGTCTATCC TCTTTATCTC
CTACCTATTG CGATTTTCGT TATGGCGGTC GCGACGCTGT ATCATATCTT CGCACTCAAA
CGCATGGTTG CGCTGCGCAC AAGACAATTG ACGATTGCTA ACCAGCAATT GCTGGAGATG
ACGTTAACGG ATTCCCTAAC AAAACTCTAC AACCGTAGAC ACTTGATTGA ACAATTGGCG
CTCTTGAATC ACTTGCAGCG AAGCTTGACG GTAATGGTAT TTGATATTGA TGATTTTAAA
TCAATTAATG ACCAATACGG TCATCTTGTC GGAGATAGAG CGATAGTGGC CGTGGCTGAA
ACAGCAAAAT CAATGACTGA TGAACGTATG ACATTGGCGA GAATTGGCGG AGAAGAGTTC
GCACTCGTGA CGGCATCGCT CTCTGAGCGA GAAGCGCGCA ACTTTGCTCA AATGCTCTGC
AAAGCCGTGT ACGAACAACC TATTATCCTT GGTGGGCAAG CGATTCATTT GAGCATTAGC
TTAGGCTGCG CATACTACCC TGAATTTACT CATATCGTGA ATTTACAAGA CGCTGATCAA
CTGATGTATC AAGGTAAGTC TGAAGGTAAA AATCGCGCGG TGTTTCAAGT CATAACAGAC
AGCCAGTTTC AACCTGAGCT TCGTCAAGTC CCTTAG
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| Protein sequence | MTYAHKSESH SLIVANSKAW KPFSYLSPDG EPKGILIDFW KAYAADNQID VQFLLLDWEA
SLQAVKEGRA DFHAGLVYSS ERADYLDFGA VIMPIQTKLY VNQDVLSIDV KSVLAGEMTL
PIGVVKGSYE SEFIKTNYPN APIAEYINND TMIQAAVAKK VLYFVADLQV ANFYMATMPG
AGMFVPVINL YSKDLRIAAG LHSSSSILDV SRAFEKVIDT DRERILNRWS VVKTVYPLYL
LPIAIFVMAV ATLYHIFALK RMVALRTRQL TIANQQLLEM TLTDSLTKLY NRRHLIEQLA
LLNHLQRSLT VMVFDIDDFK SINDQYGHLV GDRAIVAVAE TAKSMTDERM TLARIGGEEF
ALVTASLSER EARNFAQMLC KAVYEQPIIL GGQAIHLSIS LGCAYYPEFT HIVNLQDADQ
LMYQGKSEGK NRAVFQVITD SQFQPELRQV P
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