Gene VEA_001442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001442 
Symbol 
ID8559754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1632987 
End bp1633619 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID646409111 
Productthreonine efflux protein 
Protein accessionYP_003288590 
Protein GI262396737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT TATCTGTACT TCCTGTTTAT CTCACCGCAG TAGTGGCTTT GTTGCTGTTA 
CCAGGGCCCG ATATGTTGCT TATCGCGAGC TCTAGTATGA GTTACGGTAA GAAGGTCGGT 
CTGTTTGCTA GCTTAGGCAA TGCGACGTCT GGTGTTATTC TTACTTTGCT TGCTGCAATG 
GGAGTATCTA CCCTGATTGC AATGAGCCCA ATCGCCCTTA AAGTCCTTCA TCTATTAGGT 
GGCGCTTACT TGCTAAAAAT GGGCTGGGAC TGCTTACGAG CTGAGGCATC TTCGGCTCCA 
GAACTTGATA ATCAAAACAA AATGGCATCG ACTTATTATC AACGAGCCTT GATGAGTAAT 
TTGCTTAACC CTAAAGCATT GGTATTTTTT GTGATGTTTT TGCCGCAGTT TGTCTCAAGC 
AATATCACAG CGTCTTCTGG TGAGCAAATG CTGGCACTAG GGTTATTGTT GAACGTTCTT 
GGCTTGTCAT TCAATTTATT ACTTGTTGGG TTAGCAGGCA CATTGGGCAA AGGGCTGCTC 
GAGAACGAAA AATTCCGCAC GTATCAACAT AAACTAATGG GGTTAGTGTT TGTTATTCTG 
GCGTTGTGGA TGCTGAGCAG TTTCGCCTTG TAA
 
Protein sequence
MIDLSVLPVY LTAVVALLLL PGPDMLLIAS SSMSYGKKVG LFASLGNATS GVILTLLAAM 
GVSTLIAMSP IALKVLHLLG GAYLLKMGWD CLRAEASSAP ELDNQNKMAS TYYQRALMSN 
LLNPKALVFF VMFLPQFVSS NITASSGEQM LALGLLLNVL GLSFNLLLVG LAGTLGKGLL 
ENEKFRTYQH KLMGLVFVIL ALWMLSSFAL