| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001431 |
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| Symbol | |
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| ID | 8559743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1623262 |
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| End bp | 1624455 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409100 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_003288579 |
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| Protein GI | 262396726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000114311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAAAA CACCATTGTT ATTAGCGATG ATGATCATTG CCACAGGCCA AGTTGGCGTT
AGTATTTATC TTCCTTCTTT GCCTTTGATT GGTCATGACT TGAATTTGCC GCAACATTCG
ATTCAGAACC TCGTCACACT ATTTCTCGTT GGCTTCGGTA TCTCTCAGCT GTTTTATGGC
CCATTGTCTG ATGCGATTGG TCGTCGACCA GTATTTATTC TGGGCCAAAG TGTGTACCTA
GTTGGTACGG TTATGTGTAT CGCTTTTTCG GACAACATTA TTGCTCTTGA AGCGGGGCGG
TTACTTCAAG GTTTGGGAGC GGGCAGTGCC TCGGTGCTTG GTCGCTCCGT ATTGCGTGAC
AGTTATGACG GTATGCAATT AACCAAAGCG CTATCTTATA TTTCAGTAAC TGCTTCTGTG
ATGCCAATTA TTGCTCCACT GTTTGGTGGC TGGATTGCTT TTCACCTGAG CTGGCATGCT
GTCTTCGTGT TTGTGCTGAT TTACTTAATG GCTATTTTTA CGCTTGGTTT ATTGGTGCTG
CCAGAAACGC TGCCTTACCC GAAGCGAAAA TTTAAAGTAG GCCAAGTAAG CGCGAACTAT
TTGCGTCTGT TAACGAATAC TCAAGTGATT GGTAGTGCGA GCTACAACTG GCTTAGTTAT
TTATCGGCTC TGGTCACGCT CTCCTTGTAT CCATTTTTAA TGCAACAAGA GTTAGGCTTA
ACGGCGGCAG ATTACGGTTC TTTGATGATC ATACCGTCAG TTGGTTTGCT GACGGGTAGC
TTGGTGCTTA ATTTGATCAA CGCTCGTTAC AAAGCTCAGC AAATCTTGCT GATGAGTTTC
GCGATTGTTG CTATTGCTGG CTTCATGTTG TTGGTTACAC CCTTCAGTGT ATTTTCATTA
CTAGTGGCAT TTACGTGTTT AAGTTTTGCC CAAGGCATGT CGTTTCCGGT ATCAATTAGT
TTGTTGCTGT CGCCACATAA GCAACAGGCC GGAGCGGTTT CTGCGCTATC TGGATCAATT
CAAATGTGTT TAGCCGGGTT GTTTGGCGGA TACTTGGTAG ATTCTTGGGT CACGAATCAA
AACCAGCTTG GGGTGTTTTA TTTGTTTATT GCGTTACTTT CTTGCTTTGT TCTCGTACTA
AGCCAATTTC GTAAAGTGCC AGAAGGGACG ATTCAAGCAG AAACTTCCAC CTGA
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| Protein sequence | MRKTPLLLAM MIIATGQVGV SIYLPSLPLI GHDLNLPQHS IQNLVTLFLV GFGISQLFYG
PLSDAIGRRP VFILGQSVYL VGTVMCIAFS DNIIALEAGR LLQGLGAGSA SVLGRSVLRD
SYDGMQLTKA LSYISVTASV MPIIAPLFGG WIAFHLSWHA VFVFVLIYLM AIFTLGLLVL
PETLPYPKRK FKVGQVSANY LRLLTNTQVI GSASYNWLSY LSALVTLSLY PFLMQQELGL
TAADYGSLMI IPSVGLLTGS LVLNLINARY KAQQILLMSF AIVAIAGFML LVTPFSVFSL
LVAFTCLSFA QGMSFPVSIS LLLSPHKQQA GAVSALSGSI QMCLAGLFGG YLVDSWVTNQ
NQLGVFYLFI ALLSCFVLVL SQFRKVPEGT IQAETST
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