Gene VEA_001425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001425 
Symbol 
ID8559737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1616690 
End bp1617361 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID646409094 
Productpredicted membrane protein 
Protein accessionYP_003288573 
Protein GI262396720 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00453173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTCCA GACTTCCTCG TTGGGTGGAA TATGGCGCGT TTCTACTTGC CCTTCTCGCG 
GGCTGCGTCA ATGCCGTTGG TCTTCTCGGC TTTCAACATC AAGCGATAAC ACATCTTTCG 
GGAACCGTAA CTCAGCTAGG GAACAGCTTG CTAACAGGTG TGGATAGCTC CATTCACCTG 
CTCTTCATCG TATTTAGCTT TTTGATCGGT GCTGCCTTTA GCGGTTTTTT TATTGAGAGC 
AGTGCGTTAA AACTAGGGCG AAGATATGGT GTTGCACTGT GCATAGAAGG GAGCTTGCTC 
CTACTCAGTT TGGGCTTTTT GGTGCAAGGG GATTTGTACG GCCAATATCT AGCGTCAGCA 
GCATGTGGAT TACAAAACGC AATGATCACT ACATTCAGCG GCGCAGTAGT CAGAACCACA 
CATATGACTG GGATCATCAC CGATCTGGGG ATTATGATTG GAGAAAGCTT AAGAGGTCGC 
CAATTTGATC GACGTAAAGC AAAGCTATTC CTATTCATTT TCTTCGGATT CTTGCTTGGC 
GGTGTCGCAG GAGCCGCACT TTTCGTGGTA TATGGATTAT ATACGCTCGT TTTCCCTGCA 
ATATTGGCTT TCGCTACGGC TCTGATCTAC TGGAGTTACC TTTACATGCT TAGTCGCCAA 
CAAAAAGCAT AA
 
Protein sequence
MISRLPRWVE YGAFLLALLA GCVNAVGLLG FQHQAITHLS GTVTQLGNSL LTGVDSSIHL 
LFIVFSFLIG AAFSGFFIES SALKLGRRYG VALCIEGSLL LLSLGFLVQG DLYGQYLASA 
ACGLQNAMIT TFSGAVVRTT HMTGIITDLG IMIGESLRGR QFDRRKAKLF LFIFFGFLLG 
GVAGAALFVV YGLYTLVFPA ILAFATALIY WSYLYMLSRQ QKA