| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001408 |
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| Symbol | |
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| ID | 8559720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1598768 |
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| End bp | 1599547 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409077 |
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| Product | transcriptional regulator AraC/XylS family |
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| Protein accession | YP_003288556 |
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| Protein GI | 262396703 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCATC AATATCAAGT GACGCTGTTT CGTGCGGAGC AGCAGCAAAA GCTACGTAAC
GTCAGGATTC ACTCCCCGAG TATTATCCAG ATCATTAAAG GGAGTAAGCG TCTGTTTTGG
AAAGACGAAG CGTTTGATAT TCTTCATCCT AACATCATGC TTTGTGAAGC AAACGCTTCG
CTGAATTTTG AAAACCTTCC TCAACAAGGG CGTTTTCTTT CACGAATGTT CAGTTTTCAC
TGCGTACCTA GCGATGAAAT GTTAGAGCTG AGTATGAGTA ATGCATTGGG AAATTACGTC
CCAGCGGTGG AGACAGACAA AGCACTGCAA GCGACATTAA ATGCCTTGTT TTCTTTTGAA
CGGGAAAGTT TAAGTGAAGC GACGCAACGT TATTGGATGA TGGGGTTGTA TCAGCAGTTA
GCAGAGCGAG GACTATTGCA TCGACTTTTC ACGAGTTCCA ATACCTCGTT CAGTCAGAAA
CTCAGCCGCT ATCTGTCACG CTCTCCGGGC GATGACCACC CTTTGGAATT TGTTGCTGAG
CGCTTTGCTA TGAGCCGAGC AACGTTGATA CGCAAACTCA AACAAGAGGG CACTCAGTAT
CGCGAAGTGC TGGCAGAAGT GCGCTTAAAT CACGCACTCT ACCTGATGCA AAATGGTTCA
TACAACGTTG CGTTACTCGC GCAGTTGTGT GGCTATCAAT CGGAAGGCCG TTTTAGCCAA
CGATTTAAAG GGAAGTTTGG TTTAACGCCC AGTGAGTACA TAAAAACTGT CGTCAGTTAG
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| Protein sequence | MGHQYQVTLF RAEQQQKLRN VRIHSPSIIQ IIKGSKRLFW KDEAFDILHP NIMLCEANAS
LNFENLPQQG RFLSRMFSFH CVPSDEMLEL SMSNALGNYV PAVETDKALQ ATLNALFSFE
RESLSEATQR YWMMGLYQQL AERGLLHRLF TSSNTSFSQK LSRYLSRSPG DDHPLEFVAE
RFAMSRATLI RKLKQEGTQY REVLAEVRLN HALYLMQNGS YNVALLAQLC GYQSEGRFSQ
RFKGKFGLTP SEYIKTVVS
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