| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001406 |
|---|
| Symbol | |
|---|
| ID | 8559718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1597233 |
|---|
| End bp | 1598024 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646409075 |
|---|
| Product | phenazine biosynthesis PhzF family protein |
|---|
| Protein accession | YP_003288554 |
|---|
| Protein GI | 262396701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGG ATATCTTCGT CGTTGACGCA TTTACAGACA CGCAATTTAA AGGCAACTCA
GCCGCAGTCG TACCCTTGCA AGAGTGGTTA GAACCAGATC TAATGCAAAA CATTGCAGCG
GAAAACAACC TCTCTGAAAC CGCGTTTGTT AAAGCGATTG GTACGAATCA ATATGAAGTA
CGCTGGTTTT CGCCACTCAC AGAAATCGAC TTTTGTGGAC ATGCAACGCT CGCCGCTTCT
ATGGTGTTGT TCGACCAACT AGGCGTTACA GGAAGTATTG AGTTTCACAC ATTAAAAGTG
GGCACCTTAA CCGTAATTAA GAACGCACTT GGCAAGATTG AAATGACATT TCCGACAAGA
GCGCCACACC CCGTCAACGC CATTCCTACG CAATTAATTG AGGGATTAAA CTGCGAAGTA
ACACACGTAC TGCTTAGCCC GCAAGCTTAC TTCGTCATCG TGGAAGATGA GCAAACCGTT
TTCGATGTTC AATATCGATC CGACCAACTG AAACAACTCG CCCCTTACGA TGTCGTCGTC
ACATCAAAAA GCAGTCAATA CGACTTTGTA TCTCGCTACT TTTGGCCAGC AAACGGCGGA
GATGAAGACC CTGTCACAGG ATCAGTCCAC GCAGGCTTAG CACCATATTG GGCGCAAGAG
CTCGGCAAAG CATCTTTAGT GGCGTATCAA GCATCAGCGC GTGGTGGCGT TCTGTACTGC
GAAGTCAAAG AGGATTGCGT CAATGTATCT GGTGATGGTG TGTTGTATAT GAAAGGCAAA
ATTTACGTCT AA
|
|---|
| Protein sequence | MELDIFVVDA FTDTQFKGNS AAVVPLQEWL EPDLMQNIAA ENNLSETAFV KAIGTNQYEV
RWFSPLTEID FCGHATLAAS MVLFDQLGVT GSIEFHTLKV GTLTVIKNAL GKIEMTFPTR
APHPVNAIPT QLIEGLNCEV THVLLSPQAY FVIVEDEQTV FDVQYRSDQL KQLAPYDVVV
TSKSSQYDFV SRYFWPANGG DEDPVTGSVH AGLAPYWAQE LGKASLVAYQ ASARGGVLYC
EVKEDCVNVS GDGVLYMKGK IYV
|
|---|
| |