| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001405 |
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| Symbol | |
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| ID | 8559717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1596112 |
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| End bp | 1597146 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409074 |
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| Product | hypothetical protein |
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| Protein accession | YP_003288553 |
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| Protein GI | 262396700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CTGGTCACGT GCATTTTTAT ATTGGCACTT ACACCAACCC ACCGAGTACG
AGCACGGGCA TTGCGCGTGT ATCGCTGAAC ACTGAAACGG GTGAACTGAC TCGGCTTGAC
GATGTTGCTG TTCAACGTAA TCCGTCCTAT CTCACGATCA CCGAACACGG GCTGTATACG
TTTAGCGAAA TGGATAGAAA TGAAGGTGCA GAGCTCGCGT TTTTTCGCGG TAGTGAATCC
GTCTCTTTGC CGATTAATGG CGATTATCCG TGTCATTTGG ATATCAAAGA ACCGTTGTTG
GCGGTTGCTA ATTATGGCTC TGGAAATGTT AGCGTATTTC AATTGGATCG CGATGGTAAA
CCGCTTGGTT TGTTGACGGA TTTATACGTT GATGGATGCG GGCCGAATTT AGAGCGCCAA
ACTTCTCCTC ACGCTCATCA AGTCACGTTT TTAAAGCACA GTGATCAATT GGTTGCCGTA
GACTTAGGCA GCGATAGCGT CCTTATTTAT GATTACGAGG CTCAACAGTC GGATTTTTCA
CTGTCGCAAG TGATTCATTT ACCCGCAGGT TCGGGACCGC GCCATGTGGT GTTTAACCAA
CAAGAGTCGA CAGCGTATGT GGCTTGCGAA CTGTCAGAAA CCTTGATTGT TCTGGTTAAG
CACCAAGATA AATGGCTTAT CTCGAATCAA ACAGAATTAT TAGAAAGGGA AGATAATCAG
CAAGCGGCGG CGGCGATTCG TCTTTCGTTA GATGAAACGT TTTTGTATGT CTCTTGCCGA
GCTCAGAACA AAATCAGTGT GTTTGATGTG TCTGGTGATA CGCCCAAAAG GCGAGCAGCC
ATTCACTGTG AAGGGGCTTT TCCACGAGAT TTTGTGTTGT CTCATGATCA AAAGTGGTTG
CTGGTTGCCA ATCAACATTC CAACAATGTG GTGAGCTTTC GTCGCAATCC TCAAACAGGG
GAAATTACTG CAACGGGTTA TGACTGTGAG ATAGGCTCTC CAGTGTGTAT TGTCGAACAC
CTTTGTAACG ATTAA
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| Protein sequence | MTTTGHVHFY IGTYTNPPST STGIARVSLN TETGELTRLD DVAVQRNPSY LTITEHGLYT
FSEMDRNEGA ELAFFRGSES VSLPINGDYP CHLDIKEPLL AVANYGSGNV SVFQLDRDGK
PLGLLTDLYV DGCGPNLERQ TSPHAHQVTF LKHSDQLVAV DLGSDSVLIY DYEAQQSDFS
LSQVIHLPAG SGPRHVVFNQ QESTAYVACE LSETLIVLVK HQDKWLISNQ TELLEREDNQ
QAAAAIRLSL DETFLYVSCR AQNKISVFDV SGDTPKRRAA IHCEGAFPRD FVLSHDQKWL
LVANQHSNNV VSFRRNPQTG EITATGYDCE IGSPVCIVEH LCND
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