| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001399 |
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| Symbol | |
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| ID | 8559711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1586890 |
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| End bp | 1591053 |
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| Gene Length | 4164 bp |
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| Protein Length | 1387 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646409068 |
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| Product | formate dehydrogenase-O major subunit |
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| Protein accession | YP_003288547 |
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| Protein GI | 262396694 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA GTAACGAGAA AATTCCGTGT GATTTGTGTG TGGTCGAAGT GGAAAGTGGC
GGAACTAAGC GCGCCTGTGA TCTCAAAGTG TACCGCGGTC TCAATGTCGT CACACAATCA
GAACAACTGA GTGAGCACCG CAGAAAAGCG CTCAACCGAA TCATGACGGA CCACTACGCC
GACTGTGAAG CTCCATGCAA AACGGCGTGT CCTGCTGGGG TAGACATCCA ATCTTATCTC
TACCATATCT CGCAAAACGA TCATCAAAAA GCGATTGAAG TTATTAAACG CACACTACCA
ATGCCGTTGT CGATTGGGCG TGTGTGTCCG GCATTCTGCG AAAGTGAGTG TCGCCGTTCT
TTGGTGGATG AGCCGATTGC CATTCGCCAA CTCAAACGCC ATGCCGCAGA CGCAGATTTA
GCGGCGCATG AAGCGTATGT CCCAGAGAAA AAACCAGCGA AGCATCGCAA GATCGCCGTT
GTTGGTAGTG GCCCCGGTGG CTTAACGGCA GGTTATTACT TGTCGAATGA AGGTTATGAC
GTCACCGTAT TTGAGTCCAT GCCCAAAGCA GGCGGTTGGC TACGCTACGG CATTCCTGAA
TATCGCCTAC CCAAAGACAT TCTAGACAAA GAAATCGAAC TGATGTGCCG CAACGGTATG
CAAGTTGAAA CCAACAAAAA GCTTAGTGTT GATTTCACGC TGTCGCAATT GAGTGAAGAC
TACGATGCTG TCTGTTTGGC AGTGGGGGCG TCTCAAGCGG TAGAAATGAA GTATCCTGGT
AGCGAGTTGG ACGGTTGCTA CCTCGGTGTT GATTACCTGA AAGATTACGT TACAGAGCAA
AACTACGTTA CGGGCAAAAA AGTTGCCGTG ATTGGTGGTG GTAACACTGC GATCGACTGT
GCGCGTACGG CGCGTCGTGC GGGTGCCGAT ACCACTTTGA TCTATCGTCG AACTCGCGAC
GAAATGCCGG CCGAAGACTA CGAAATCGTC GAAGCTGAAC ATGAGGGCGT GAAGTTCCAT
TTCTTGACGA ATCCGGCGGA AAACATCGCG GATGAAAACG GCCGCGTGAA GGCAATTCGA
TTAGAGCGAA TGGCGTTAGG TGAGCCAGAT GCGTCTGGTC GTCGTAGCCC GAAACCAACG
GGTGAGTTCT TTACTGAAGC ATTTGATACC GTGATTGCAG CTGTATCGCA AAAGCCGGAT
CTCAGCTTCT TAGAAAACGA TGAGCTGTCC ATTCCTCTAA CGCGTTGGAA CACATCTGAG
TCCGACTCGC AAACCATGCA CACGGGTACG GGCAATATCT TCAGTATCGG TGATTTTCGT
CGTGGTCCTG CGACTGCGGT TGAAGCGGTG GGGGATGGGC GAGTTGCGGC AAAAGCGATT
GATCTGTTCC TCAATGGCGA TATGGCGGAT ATGCCGAAAC CTGCGTTCAA CTCTCGTAAA
GAGAAAAAAC TGGCGCAGGT TGACCCACTT CATTTTGAAA ACATCCAAAA AGTTGCTCGT
TCAATCATGC CGGAGTTGAC TCCAGCGCAG CGTGAGCAGA GTTTTGCTGA AGTGGAACTG
GGCTTTGATA ACGAAGAGGC CATGAAAGAA GCGGCGCGCT GCTTAGAGTG TGGTTGCCAA
GCGAATACCG ACTGTGCCTT GCGAGATTAC TCAACGGAAT ATCATGCCGA GCAACATTTC
GATGTTTCCG TGGACGTTTC CTCTGCTAGC GTGATTGGTC ATCAAGATTG GCTCGATTTG
CGAGCGAAAG ATCTTCGTCA TAAATACGAA GTAGACCGCA GTTCTGAGTT CATTGAATTT
GATGCTAACC GCTGCATCAG TTGTGGTCAG TGTATTCAAG CATGCCGCGA GCAAGCGGTA
CATGGTGTGT TGAGTTTTGT GTCGGATAAA AATGGCCGAC CAGCTTTACG ACCAGATGAT
CGTCCACGAT TCCGCTCCGA TGAAAAAGGC GCAAGTTGCA GTGGTTTGAC GCTCATGGGC
AATTCAAATT GCGTGCAATG TGGGGCGTGT GTTCAGGCAT GTCCAACGGG CGCGATGGTG
GACAGCCGTG ACCGCTCTCA AGGCAGAACC GAACAGCTAA AAGCCGTCGA TACCATTTGT
ACCTATTGTG GTGTGGGTTG TAAGTTGACC ATGTTTGTCG ATGAGCGACA AAACAAAATC
CGCTATGTAA AAGGTGCGGA TTCGCCAGTT AACCAAGGAA TGCTGTGCGT GAAAGGCCGT
TTTGGTTTTG ATTTCATTAG CAGCGAAGAG CGTTTAACGA CACCACTGAT TCGTAAAGAT
GGTTGGTTGC AGCCAGCAAG TTGGGACGAA GCGATTCAGC TAGTGGCTTC GAAGCTTTCG
ACCATCAAGC AAGATTTTGG TAACAACGCA CTGGCCGGAT TCTCTTCAGC GAAAACCACT
AACGAAGATA ACTACGCGTT TCAAAAATTC ATCCGTCGTG AACTTGGTAC GAACAACGTT
GATCACTGCG CACGTTTGTG TCACGCATCA AGTGTGACAG GGCTTGAAGC ATCGTTGGGG
AGTGGTGCGA TGACCAACGA CATTCCGAGC ATTAAGCATT CCGATGTGAT CTTTATTATC
GGTTCTGACA CCACATCTGC GCACCCGATC ATCGCTTCGC ACATCAAACA GGCGATTCGT
CATCACGGGG CACGCTTGAT TGTGGCAGAC CCGAAACGAG TGGACATGGC CGAACATGCA
GATCTGTACT TAGCGCATCG ACCGGGTACG GATGTTATGT TGCTCAACGG CGTGATGCAG
CAAATCATCA AAAATGGTTG GTACGATCAA GAATACATCG AAGAGCGCGT CGACGGCTTT
GATACCTTGC TTCAAGAGGT GATGTCACCA GCGTACAACC TCGACAAAGT TGAGTTAGTG
ACGGGCATAA AAGCGGACGA TATTTTCGCG ATGGCGCGAA TGATTGGTAC GGCAAAACGC
ACCGCGGTGT ATTACTCAAT GGGTATTACC CAGCATACGA CAGGGCACGA CAACGTTCGT
TCGATTGCAA ACCTGCAATT GTTGTGTGGC AACATCGGTA TTGAGGGTGG TGGTATTAAC
CCACTGCGCG GTCAATCAAA CGTACAAGGT GCGTGTGATA TGGGCGCATT GCCGAACTGT
TATCCGGGAT ACCAAAAAGT GTATAACCCG ATTGTTCGTC AGAAATTCGC GATTGAGTGG
GATGCCCCGA ACTTACCTTC TGAGCAAGGG CTTACCCTAA CGGAAATCAT CGATGCGGCG
TGCAAACGAG AAGTTCGCGG GATGTACATC ATGGGCGAAA ACCCAGTACT GAGTGATCCA
AACCAAGCAC ACGTGATTGA AGGGTTGGAA GCACTCGACT TCTTGGTCGT GCAAGACATC
TTCCTCACCG AGACGGCGCA GTACGCCGAT GTGGTATTGC CTTCTTGTTC ATTTGCGGAA
AAATCCGGTC ACTTCACCAA TACTGAGCGA CGCGTGCAGC GCGTTAATGC GGCAGTGAAA
GCGCCGGGTG AGGCGAAAGA AGATTGGTGG ATCATTCAAG CGATCGCAAA CGCGATGGGC
AGCGATTGGC ATTACCAGTG TGTTTCTGAA ATCACTAGCG AGATCGCGCG TGTAACGCCG
CAATATGCAG GGTTGCGTTG GGACGCGATC ACGCCGAACG GTGTTCAATG GCCAAGTAAC
AAGAACAATC CAAATGGTAC TCGTATCATG CACCAAACCC AATTTACCCG AGGGAAAGGG
CAAATGGTGG GCGTGCCGTT CCGCTATGCA GCTGAGTTGC CTGATGAAGA GTATCCTTTG
GTGCTTACAA CAGGGCGTGT GCTAGAACAG TTCCACACCG GTACGATGAC ACGCAAAACG
AAAGGGTTGG ATAACCTTGC TGGGCCAAGA GCGATGATCA GTGTTGAAGA TGCCGAAGCA
ATTGGTATCC ACAATGGTCA GCGCCTAAAA GTGTCGACTC GTCGTGGCAG CATCGAAATT
GATGCGTTTG TGACCAAGCG AATGCAAAAA GGGGTGGTGT TTATCCCATT CCATTTCGTT
GAGTCGCCAG TCAACCGCTT GACGACCACG GCAACGGACC CGCATGCGAA AATTCCTGAA
TTCAAAGTCG CGGCGGTGAA GATTGAAATC AGTGAAACGG CCGCTCAACC AGAGCCTGTC
GAGGAGGCGG TACACCACCT CTAA
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| Protein sequence | MNKSNEKIPC DLCVVEVESG GTKRACDLKV YRGLNVVTQS EQLSEHRRKA LNRIMTDHYA
DCEAPCKTAC PAGVDIQSYL YHISQNDHQK AIEVIKRTLP MPLSIGRVCP AFCESECRRS
LVDEPIAIRQ LKRHAADADL AAHEAYVPEK KPAKHRKIAV VGSGPGGLTA GYYLSNEGYD
VTVFESMPKA GGWLRYGIPE YRLPKDILDK EIELMCRNGM QVETNKKLSV DFTLSQLSED
YDAVCLAVGA SQAVEMKYPG SELDGCYLGV DYLKDYVTEQ NYVTGKKVAV IGGGNTAIDC
ARTARRAGAD TTLIYRRTRD EMPAEDYEIV EAEHEGVKFH FLTNPAENIA DENGRVKAIR
LERMALGEPD ASGRRSPKPT GEFFTEAFDT VIAAVSQKPD LSFLENDELS IPLTRWNTSE
SDSQTMHTGT GNIFSIGDFR RGPATAVEAV GDGRVAAKAI DLFLNGDMAD MPKPAFNSRK
EKKLAQVDPL HFENIQKVAR SIMPELTPAQ REQSFAEVEL GFDNEEAMKE AARCLECGCQ
ANTDCALRDY STEYHAEQHF DVSVDVSSAS VIGHQDWLDL RAKDLRHKYE VDRSSEFIEF
DANRCISCGQ CIQACREQAV HGVLSFVSDK NGRPALRPDD RPRFRSDEKG ASCSGLTLMG
NSNCVQCGAC VQACPTGAMV DSRDRSQGRT EQLKAVDTIC TYCGVGCKLT MFVDERQNKI
RYVKGADSPV NQGMLCVKGR FGFDFISSEE RLTTPLIRKD GWLQPASWDE AIQLVASKLS
TIKQDFGNNA LAGFSSAKTT NEDNYAFQKF IRRELGTNNV DHCARLCHAS SVTGLEASLG
SGAMTNDIPS IKHSDVIFII GSDTTSAHPI IASHIKQAIR HHGARLIVAD PKRVDMAEHA
DLYLAHRPGT DVMLLNGVMQ QIIKNGWYDQ EYIEERVDGF DTLLQEVMSP AYNLDKVELV
TGIKADDIFA MARMIGTAKR TAVYYSMGIT QHTTGHDNVR SIANLQLLCG NIGIEGGGIN
PLRGQSNVQG ACDMGALPNC YPGYQKVYNP IVRQKFAIEW DAPNLPSEQG LTLTEIIDAA
CKREVRGMYI MGENPVLSDP NQAHVIEGLE ALDFLVVQDI FLTETAQYAD VVLPSCSFAE
KSGHFTNTER RVQRVNAAVK APGEAKEDWW IIQAIANAMG SDWHYQCVSE ITSEIARVTP
QYAGLRWDAI TPNGVQWPSN KNNPNGTRIM HQTQFTRGKG QMVGVPFRYA AELPDEEYPL
VLTTGRVLEQ FHTGTMTRKT KGLDNLAGPR AMISVEDAEA IGIHNGQRLK VSTRRGSIEI
DAFVTKRMQK GVVFIPFHFV ESPVNRLTTT ATDPHAKIPE FKVAAVKIEI SETAAQPEPV
EEAVHHL
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