| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001396 |
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| Symbol | |
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| ID | 8559708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1582664 |
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| End bp | 1584379 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646409065 |
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| Product | probable Co/Zn/Cd efflux system membrane fusion protein |
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| Protein accession | YP_003288544 |
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| Protein GI | 262396691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAA ATTCAATCAA GATAGCAACC ATCGCTCTGC TTGTTGGCGG GGCACTAGGG
TTTGGCGTTA ATCAGTACCT ATCTGGTGCA AACCACGACA TGAGTGGCTC AGGAGCTAAC
GCTGCAAGCA GCTCAAACGA GCCACTCTAT TGGGTTGCTC CAATGGATCC AAATTATAAG
CGCGACAAAC CGGGCAAATC GCCAATGGGC ATGGACTTGA TCCCAGTGTA CGCCGAAGAT
CTCGCAGGTG AACAAGACAA ACCCGGCACG GTAAAAATTG ACCCATCGGT TGAAAACAAC
TTAGGTGTAA AAACCGCTCA AGTCTCTTTA GAGCAACTTT CACCTCGAAT TGAAACTGTC
GGATATATCG CATTTGACGA AAGCCATTTG TGGCAAACCA ACGTTCGCGT GGCGGGCTGG
GTTGAAAAGC TTTACATCAA TGCCGTGGGT GAAAAGGTCA ACAAAGGCGA TGTGCTGTTC
ACGCTGTATT CGCCTGAGCT AGTCAAAGCA CAAGAAGAGC TACTGAACGC CTACCGAACT
GGGCGTAATG GTCTGGTGAA AGGCGCGACA GAACGTTTAG TGACACTGGG TGTTGATCGT
TCTCAAATCA GAGCCATCAC TCAACGCGGG AAAGCATCGC AAACTATTGA AATTAAAGCT
CCGGAAGATG GCGTCATCGC GAGTTTGAAC GTTCGTGAAG GTGGTTACCT ATCCCCTGCT
CAAGCGGTGA TCAGCGCGGG CCCACTTGAA AATGTATGGG TGGATGCCGA AGTATTTGAG
CGCCAAGCTC ACTGGATGAA AGCAGGAAGT AGCGCCACTA TGACGCTTGA TGCTATTCCA
GGCAATGAAT GGAAAGGGGT TGTCGACTAC GTATACCCTA TTCTGGATCC TAAAACTCGT
ACCTTGCGTG TACGCCTCAA GTTCCCTAAC CCGAATGGCG ATCTTAAACC TAATATGTTT
GCCAACATTG CCCTTCAACC AGTCACTGAT AACGCAGTTA TGACGATTCC TAAGTCTTCC
GTTATTCGAT CCGGCGGTAT GACCCGAGTC GTGTTGTCTG AAGGCGATGG TAAATACCGC
TCAACGCGCA TCAAAGTTGG GCGTGAAGCC GACGACAAAA TCGAGGTGCT ACAAGGTCTG
TCTCAAGATG ATCGCATCGT AACCTCTGCA CACTTTATGT TGGATTCGGA ATCGAGCCAA
ACGGCTGATC TATCCCGTAT TTCATCACCT ACTGAAGCCA AAGTAGAAAC AGTTTGGGCT
AAGGGTGAAA TCACCGATGT GATGAAAGAT CACCGTATGT TGACCATTAA TCATCAGCCC
GTAGCAGAGT GGAATTGGCC GGGTATGGTC ATGAACTTTA CCCTCGCAGA TGACGTTGAT
GTGGGCACTC TGCAAAAAGG CCAAGCTATC GAGTTTGAAA TTCAGAAAAC AGAGTCCGGT
CAATATGAAG TCGTTGACTA CAAAACCGAT GACAGCGTTG TCGTGACTGA CGTATGGATT
ACCGGAGATA TCAGCATGTT GATGGCGGAT TTTGGGATGA TAACTCTCAA CCACCTCCCA
GTTGCAGAAT GGAACTGGGA GGCAGGAGAG ATGAACTTCT CTGTGGGTGA TGAAGTGGAT
CTATCCGGAT TCAAAGAAGG TCAGAAAGTA CGGTTTTTAG TTGAAAAACA AGGAGCTGAC
TACGTCTTGA AGCAACTTGA AGCGGTTGAG GGCTAA
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| Protein sequence | MSSNSIKIAT IALLVGGALG FGVNQYLSGA NHDMSGSGAN AASSSNEPLY WVAPMDPNYK
RDKPGKSPMG MDLIPVYAED LAGEQDKPGT VKIDPSVENN LGVKTAQVSL EQLSPRIETV
GYIAFDESHL WQTNVRVAGW VEKLYINAVG EKVNKGDVLF TLYSPELVKA QEELLNAYRT
GRNGLVKGAT ERLVTLGVDR SQIRAITQRG KASQTIEIKA PEDGVIASLN VREGGYLSPA
QAVISAGPLE NVWVDAEVFE RQAHWMKAGS SATMTLDAIP GNEWKGVVDY VYPILDPKTR
TLRVRLKFPN PNGDLKPNMF ANIALQPVTD NAVMTIPKSS VIRSGGMTRV VLSEGDGKYR
STRIKVGREA DDKIEVLQGL SQDDRIVTSA HFMLDSESSQ TADLSRISSP TEAKVETVWA
KGEITDVMKD HRMLTINHQP VAEWNWPGMV MNFTLADDVD VGTLQKGQAI EFEIQKTESG
QYEVVDYKTD DSVVVTDVWI TGDISMLMAD FGMITLNHLP VAEWNWEAGE MNFSVGDEVD
LSGFKEGQKV RFLVEKQGAD YVLKQLEAVE G
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