| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001391 |
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| Symbol | |
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| ID | 8559703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1575010 |
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| End bp | 1575993 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409060 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_003288539 |
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| Protein GI | 262396686 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00410317 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATAG GGTTTGTTCA CTTTTTAGCT CAATCGGAAA CATTGCAGCA GGTGCTTGAT
ACGGTCGCAG AATGGATAAA TCGTATATTC AATTCCGACC GCGCGAGTAT CACGCTTTAT
GAAAATGATG ATCATCTAAA GGTCTACTCT TTCTCTGGTA ATAAAGCGAT TCCGGCTGAA
TTCTTGGTAC CTATTCACCG AGCTTTTGTT GGCCGAGTGT TCAAAAAACA ACAACTGATG
ATCTGTGACG ATGTCACTCA ATCTGATGAG GTCGATTGTG TGATGCTGGC ATCCAATGGC
ATGGGGACGT GTATGGATGC GCCTTTAATG CACGGTAAAG TCTGTTTGGG CACGCTTAAT
GTTGCACATC ATCAAACGCA CACTTATACA AACGAACAAG CGGCACAGCT TCAGTGCATC
GCTAACTGGA TTGCTTTAAA CATTGCTCTT CATATACAAA TTATGAAAAT GGAGCATCTC
GCCACAACGG ATGATCTGAC TGGCATTCCA AACCGCAGAG AATTCATGCG ACAAATCGAA
AGCCGCTTGA CTGAATACCG CACCCAAGGC ATTGACTTCC ATGTTGCTAT TCTAGATTTA
GACAACTTTA AGAGCCTTAA TGATCGGTTT GGTCATGATG CTGGCGATAA ATCGCTGATC
CATGCAGTCA ACACCATTCA AAGTCATCTA CTTGACTGTG ACTTACTTGC CAGAGTTGGC
GGTGAAGAGT TTGCCATCGT ACTAAGAAGC CGGTCATCGC AAGAAGCCCT AAACACATTA
GAAACGATTC GCAATGCGCT AGAAACTACG ACGATTCAAC ACTCAGGTCG TGATATGAGC
TTTACCGCTA GTATTGGTGT AACTCAAGTC TGTAGCTTGG ATGACTCGTT TGAACCACTC
GTAAAACGCG CCGACTTAGC CCTTTACAAA GCTAAAGAAA CCGGTAGAAA CCGTGTTGAG
GTTCATAAAA CAGAAGAAAA CTAG
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| Protein sequence | MPIGFVHFLA QSETLQQVLD TVAEWINRIF NSDRASITLY ENDDHLKVYS FSGNKAIPAE
FLVPIHRAFV GRVFKKQQLM ICDDVTQSDE VDCVMLASNG MGTCMDAPLM HGKVCLGTLN
VAHHQTHTYT NEQAAQLQCI ANWIALNIAL HIQIMKMEHL ATTDDLTGIP NRREFMRQIE
SRLTEYRTQG IDFHVAILDL DNFKSLNDRF GHDAGDKSLI HAVNTIQSHL LDCDLLARVG
GEEFAIVLRS RSSQEALNTL ETIRNALETT TIQHSGRDMS FTASIGVTQV CSLDDSFEPL
VKRADLALYK AKETGRNRVE VHKTEEN
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