Gene VEA_001389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001389 
Symbol 
ID8559701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1573954 
End bp1574496 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content38% 
IMG OID646409058 
Productspermidine N1-acetyltransferase 
Protein accessionYP_003288537 
Protein GI262396684 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.091207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA AAGGCCTAAA AATGCGTGCA CTAGAACGCT CTGATTTGCG CTTTATTCAC 
GAACTAAATA ACAACCGAAA TATCATGGCC TACTGGTTCG AAGAGCCTTA TGAATCTTAT
GATGAGCTCG AAGAACTGTA CCGAAAACAT ATACATGATG ACGCAGAAAG ACGCTTTGTG
GTTGAAGATG AAGACGGCAT AGTGATTGGA TTGGTCGAAC TTATTGAGAT CAACTACATT
CACCGAAGCG CTGAGTTTCA GATAATCATC GCCCCAGAGC ATCAAGGACG AGGTTATGCG
ACAGAGATGA TTAATCGTGC ATTGGATTAC TCCTTCTCGA TTCTTAATCT ACGTAAAATA
TACTTATTGG TCGCAGTGGA TAATGAAGTC GCTATTCATT TATATAAGAA ATGTGGTTTT
ATTGAAGAAG GCCATTTAGT AGAAGAATAC TTTATTAACG GAGCCTATAG CGATGTTAAG
CGCATGTATA TATTAAAACA CCAATATCAG AAAAAGATCG AAGAAAAGAA CGCGATTCAC
TAA
 
Protein sequence
MMKKGLKMRA LERSDLRFIH ELNNNRNIMA YWFEEPYESY DELEELYRKH IHDDAERRFV 
VEDEDGIVIG LVELIEINYI HRSAEFQIII APEHQGRGYA TEMINRALDY SFSILNLRKI
YLLVAVDNEV AIHLYKKCGF IEEGHLVEEY FINGAYSDVK RMYILKHQYQ KKIEEKNAIH