| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001372 |
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| Symbol | |
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| ID | 8559684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1551766 |
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| End bp | 1554192 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646409041 |
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| Product | microbial collagenase secreted |
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| Protein accession | YP_003288520 |
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| Protein GI | 262396667 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00032964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCATA TCCGTTTTTT CCCGCGCCAT CGTTTGGCGC TTGCTTGTAT GCTAGCGAGT
GTGTCTAGCT TCTCTTTTGC ACAAAACCAG TGCGCTGTTG CTGATCTACA ACAATCGAGA
GACTTGGCTG CTGCCGTTTC TGGTGCTGAG TATGATTGCT ACCACGCTTG GTTTTCAGCT
CCTTCCGCAA CGCTGAACGA TATTTACAGC GAAGCGAGCT TAAGCCGTAT CCAAGTCGCG
TTGGATCAAG AAATTGCCCG CTATCGTGGA GAAGCAGAGC AAGCTCGTGT TCTAGAAAAT
CTGGGCGAGT TTATTCGAGC GGCCTACTAC GTTCGTTACA ATGCTGGCAC AGCTACACCT
GAGTTTTCGC AAGCGTTGAG TCAGCGTTTT GCTCAGTCGA CGAACCTATT CCTAAACAAC
CCTCATGCTT TGGATCAAGG CCGTGAACAA GTTGGCGCAA TGAAGAGCTT GACTTTGATG
GTTGATAACG TGAAGCAGTT GCCGCTGACC ATGGATAGCA TGATGGCCGC GTTGATGCAC
TTTAACCGTG AAACCGCGCA GGACACGCAA TGGGTCGATG GTTTAAACAA CCTGTTCCGT
TCTATGGCAG GTCATGTAGC AAACGATGAG TTCTACCGCT ACATGGCAAA CAATACTCAC
CATATTGATA CATTAGCGAG ATTCGCATCT GATAACGCTT GGGCATTGGA TACGGATGCG
AGCTTTATTG TTTTCAATGC ATTACGTGAA ACTGGTCGTT TGCTTGCGAG CCCAGATCAG
GAGACCAAAC GCAAAGCCTT GGCTGTGATG CAACAAGTGA TGCAGCGTTA CCCACTGGGT
AGTGAGCATG ACAAACTGTG GCTTGCTGCC GTAGAGATGA TGAGCTACTA CGCACCTGAA
GGTTTAAACG GTCTGGACCT AGATCAAGCG AAGCAAGATC TAGCAGCGCG CGTGATGCCA
AATCGTTTTG AGTGTCAGGG ACCTGCCATC ATTCGCTCTG AAGATCTGAC CGATGCTCAA
GCTGCGAAAG CGTGTGAAGT ACTGGCTGCG AAAGAAGCCG ACTTCCATCA AGTGGCGAAT
ACGGGCAATC AACCTGTCGC TGATGACTTG AATGACCGTG TTGAGGTGGC GGTGTTTGCT
AGTAACGACA GCTACGTTGA TTATTCTTCG TTCCTGTTTG GTAATACAAC GGACAACGGT
GGTCAGTACC TTGAAGGGAA TCCATCAAAA GCGGACAATA CCGCCCGTTT CGTGGCTTAT
CGCTATGCGA ATGGCGAAGA TTTATCGATT TTGAATCTAG AGCATGAGTA CACGCACTAT
TTGGACGCGC GATTTAACCA GTACGGCTCA TTCAGTGATA ACTTAGCCCA CGGTCATATC
GTGTGGTGGC TGGAAGGTTT TGCTGAATAC ATGCATTACA AACAAGGCTA CCAAGCTGCG
ATCGAACTGA TTGCAGGCGG TAAATTGAGC CTTTCAACTG TGTTTGATAC CACATATTCT
CACGATACTA ATCGTATCTA TCGTTGGGGT TACTTGGCCG TTCGATTCAT GTTAGAAAAT
CATCCGCAAG ACGTAGAAAG CTTGTTGGCG TTGTCGCGCA CTGGTCAGTT TGAACAGTGG
GCGCAACAGG TGACGACATT AGGTCAACAA TATGACGCAG AGTTTGAACG CTGGTTGGAT
ACGTTAGAAG TGGAGCCAGA GCAACCAGTT ACTGACCCAG AAGAGCCAAT AGAACCAACA
GAACCTGAAG CACAAGTGAC CGAATTGACG GCGAACCAAA GCCTTCAACT CAGTGGCGAA
GCATACAGTG AAAAACTGTT CTACGTTGAC GTACCAGCCA ACACCGTTCG CTTTAATGTA
TCTATTGAAG GTGCGGGGGA TGCGGATCTT TACATGAGCT ACAACAAAGT TGCGCATTAC
TACGACTTTG AAATGAGCCA GTATGGCGAT GGCAGCAATG AAGAGATTGT ATTTGAGCCA
GAGCAGGATG GTTACGTGAA AGCAGGTCGT TACTACATCA GTTTAACTGG CCGTGATAAC
TATGACTCAG TGAATCTTGT GGCTGCTTTA GACTTTGAAG CGCAAACACC GCCAACACAA
GTGCAAGACG ATTTGGCACC GGTGGTATTA GAGTCTGGTG AAGCAAAAAT GCTGACCGTT
CACAAGCAGC GTTATGCGGC AGTGTATGTA CCTGAAGGTG TTGAAGAGGT TCGTGTATGG
CTAACGGCTC ACTCTCAAAC AGGTAATGTC GACCTATACG CGAGTAGGGA GCATTGGCCT
ACAGTTGAGC AACACGAGTA CGTGTCCAAC TATGCAGGCA GCAACGAATA CCTTGCGATT
CCTGTTACTG AAGCGGGCTA TGTGCACTTC TCTCTTCAAG CACCAGAACA AGGTGATGAC
GTTGAAATGT TAGTGCACTT CAACTAA
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| Protein sequence | MSHIRFFPRH RLALACMLAS VSSFSFAQNQ CAVADLQQSR DLAAAVSGAE YDCYHAWFSA
PSATLNDIYS EASLSRIQVA LDQEIARYRG EAEQARVLEN LGEFIRAAYY VRYNAGTATP
EFSQALSQRF AQSTNLFLNN PHALDQGREQ VGAMKSLTLM VDNVKQLPLT MDSMMAALMH
FNRETAQDTQ WVDGLNNLFR SMAGHVANDE FYRYMANNTH HIDTLARFAS DNAWALDTDA
SFIVFNALRE TGRLLASPDQ ETKRKALAVM QQVMQRYPLG SEHDKLWLAA VEMMSYYAPE
GLNGLDLDQA KQDLAARVMP NRFECQGPAI IRSEDLTDAQ AAKACEVLAA KEADFHQVAN
TGNQPVADDL NDRVEVAVFA SNDSYVDYSS FLFGNTTDNG GQYLEGNPSK ADNTARFVAY
RYANGEDLSI LNLEHEYTHY LDARFNQYGS FSDNLAHGHI VWWLEGFAEY MHYKQGYQAA
IELIAGGKLS LSTVFDTTYS HDTNRIYRWG YLAVRFMLEN HPQDVESLLA LSRTGQFEQW
AQQVTTLGQQ YDAEFERWLD TLEVEPEQPV TDPEEPIEPT EPEAQVTELT ANQSLQLSGE
AYSEKLFYVD VPANTVRFNV SIEGAGDADL YMSYNKVAHY YDFEMSQYGD GSNEEIVFEP
EQDGYVKAGR YYISLTGRDN YDSVNLVAAL DFEAQTPPTQ VQDDLAPVVL ESGEAKMLTV
HKQRYAAVYV PEGVEEVRVW LTAHSQTGNV DLYASREHWP TVEQHEYVSN YAGSNEYLAI
PVTEAGYVHF SLQAPEQGDD VEMLVHFN
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