| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001356 |
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| Symbol | |
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| ID | 8559668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1538111 |
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| End bp | 1539481 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409025 |
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| Product | coproporphyrinogen III oxidase, oxygen-independent |
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| Protein accession | YP_003288504 |
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| Protein GI | 262396651 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCG ATATCGATAA ATTTGACGAA TCAGTGTTGG GAAGCGATAG CCCTGACCCA
TTGCGATTTG CCTTTGTTAA GAAACATTCG GCGCACGCTG GCGGAGCGAG CGTGCCTGTA
CCTCCACCTC AGCAACCGGC GATTTTTTCA AGCGTTACCG CTAACTCGGT TAAAGCGACC
AATAAACGTT GTCTTTATAT TCACGTTCCA TTTTGTCGCG TACGTTGCAC CTTTTGTAAC
TTCTTTCAAA ATGCTGCGAG CCGCGCACTG GTTGATGAGT ACTTTGACGC ACTGATGCAG
GAGCTCAAGG AGAAAGCTGC ATTGCCTTGG ACACAAAACG GTATTTTTCA TGCTGTGTAT
ATTGGTGGTG GAACGCCAAC GGATCTGTCT CCAGCACAGG TTCGCGTGTT AGGTCAGGCG
ATTCATGATC ACTTTCCTTT GGCTGCGGAT TGTGAAATCA CCTTAGAAGG TCGCATCAAC
CGTTTTTCTG ATGAGCTATA CCAAGGCGCT CTCGACGGTG GATTTAATCG TTTCTCTTTT
GGTGTACAAA GTTTTAATAC ACAAGTGCGT CGCAGCGCGA AACGATTAGA TGATAGAGAA
GATGTGCTAA GGCGAGTTAG CGAGATTGCC AACGAAGACA AAATTCCTGT CATTATCGAT
TTACTCTACG GCTTGCCTTA TCAAACCAAA GAAGTGTTAG AGCAAGATTT AAATGATTTT
CTCTCGACTG GCGCACACGG GTTGGACTTA TATCAGTTGG TAGTCGGTGG TTCAGCACCC
ATGCTTAACC TTGTAGAAAA AGGAAAAATC CCCCCACCAG CTACCACGCC AGAAAAAGCA
GGCATGTATG AGCTCGGTGT GAACTTTATG GCCAAACACC ATATGAAGCA ACTGAGTGTG
AACCATTGGG CAATCGATAA CCGTGAACGT AGTTTATACA ACAGTTTAGC CAAGACATAT
GCAGAGGTAC TGCCAATTGG CTGTGGCGCT GGAGGTAATA TCGGTGGTTA CGGGATGATG
CAACATCGCA CATTGGCGAC CTATATTAAA GCCATCAAAG AAGGGCAAAG TACCATTGCT
ATGATGATGA AGCAAAGCCC TCTAGAGCCA CTATTTGCTG CACTCAAATC TGGGTTTGAT
CGCGGTATCG TTCAGGCAAA CCAACTGCCA TCGTTTATGG GGGAGGACAC GTTCGGGTTT
TTAATGCCTC TATTTAAAGT GTGGCAGCAA AAAGGTTTAG TGGAACTGCA TGAACGTAGC
CTACTTCTTA CTCTTGCAGG CAGTTTCTGG GCCGTTTCAT TGGCTCAAGG TTGTATTCAG
ATACTTACGT CAGAGATGAA CGAAACCGTA CCGAAAGTAT CCAATAATTA A
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| Protein sequence | MSVDIDKFDE SVLGSDSPDP LRFAFVKKHS AHAGGASVPV PPPQQPAIFS SVTANSVKAT
NKRCLYIHVP FCRVRCTFCN FFQNAASRAL VDEYFDALMQ ELKEKAALPW TQNGIFHAVY
IGGGTPTDLS PAQVRVLGQA IHDHFPLAAD CEITLEGRIN RFSDELYQGA LDGGFNRFSF
GVQSFNTQVR RSAKRLDDRE DVLRRVSEIA NEDKIPVIID LLYGLPYQTK EVLEQDLNDF
LSTGAHGLDL YQLVVGGSAP MLNLVEKGKI PPPATTPEKA GMYELGVNFM AKHHMKQLSV
NHWAIDNRER SLYNSLAKTY AEVLPIGCGA GGNIGGYGMM QHRTLATYIK AIKEGQSTIA
MMMKQSPLEP LFAALKSGFD RGIVQANQLP SFMGEDTFGF LMPLFKVWQQ KGLVELHERS
LLLTLAGSFW AVSLAQGCIQ ILTSEMNETV PKVSNN
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