Gene VEA_001352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001352 
Symbol 
ID8559664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1535195 
End bp1536064 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID646409021 
Productperiplasmic hemin-binding protein 
Protein accessionYP_003288500 
Protein GI262396647 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00152627 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA CACGTGCCAC CATTCATGCT GTTGTTACGG CAGCCATTTC CCTACTTGCG 
AGTAGCCAAC TTTTTGCCAA TGAAACACCA TCATCAGAGC GTGTTGTTAG TGCAGGCAGT
GCCGTCACTG AACTGTTGCT TGAACTCGAC GCCAAAGATA GCTTGGTTGC TATCGACGTA
ACCAGTCAGT TACCAAAAGG CATGGAACTG CCTAAAGTAG GCTACCATCG CCGCCTTTCA
GCAGAAGGGT TGCTCGCCTT ACGTCCGACA AAAGTCATTG GCTCTGATGA GATGGGACCG
AAAACGGCAT TGAACCAATT AAAAGCGGCG GGGGTAGATG TAGAAATCGT CAATACCGAT
GCCAACGTTG AGGGCCTTTA CCAACGTATC GATCAAATTG CGAACCTTAT GAATCGCCAG
GCTAAAGCGG AAGATTTAAA GCAAGATGTG AAAGCGCAAG TTCAAGCACT CAATGCAAAT
CAACCTGCTC AAGCTCAGAA AAAGAAAGTA CTGTTTCTAC TCATCCATGA AGGTCGACCT
GCGAACGTTG CAGGATCAGA AACCACCCCC GATGCAATTA TCCAGCTAGC AGGCGGACTA
AACCCAGCTG CTGACCAGCT GTCTTCTTAC AAGCCTTTAT CCACAGAAGC CATGGTAGAG
ATGCAGCCTG ACGTTATTCT CGTTAGCGGT CGCAGCTATG AAACGCTGGG CGGTGCCGAT
GCGATTTTAA AAGCAATGCC ACTTCTCGCC GCAACACCTG CGGGAATGAA TAAAAATATC
ATCACGATTG ACGGTCACGC CCTTGTTGGT GGTTTGGGTC TTAAAAGCCT TGTAGAAGCC
GAACGCTTGA ATGCGCTGCT TTACCCATAG
 
Protein sequence
MKNTRATIHA VVTAAISLLA SSQLFANETP SSERVVSAGS AVTELLLELD AKDSLVAIDV 
TSQLPKGMEL PKVGYHRRLS AEGLLALRPT KVIGSDEMGP KTALNQLKAA GVDVEIVNTD
ANVEGLYQRI DQIANLMNRQ AKAEDLKQDV KAQVQALNAN QPAQAQKKKV LFLLIHEGRP
ANVAGSETTP DAIIQLAGGL NPAADQLSSY KPLSTEAMVE MQPDVILVSG RSYETLGGAD
AILKAMPLLA ATPAGMNKNI ITIDGHALVG GLGLKSLVEA ERLNALLYP