| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001323 |
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| Symbol | |
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| ID | 8559635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1506277 |
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| End bp | 1508457 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646408992 |
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| Product | Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis |
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| Protein accession | YP_003288471 |
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| Protein GI | 262396618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGGA CTCATCCAAA TAATCTCCAG ATGAACAAAG TAGAACTGAT TCGTTTTGGT
CATCACTTTA AAGCGATTAA AAAGAATTGG CTAAGCATCG CAGCTTTCAC GCTTCTGTTT
TCATTAACTT GTACTTGGTA TATCTACTCC AAAGCATCGA TATACCAAGC TACAGCAACG
CTACTCATCC AAGAAGAGCA AAAAAGTGCC CTTTCAATCG AGGAAGTATA TGGTGTCGAC
ACAACAAAAA AAGAGTACTT TCAAACGCAA ATCGCTATTT TAAAATCGAA TCATATTGCA
GATAAGGTCA TTAGAGAGCT GAACCTAACT CAACAACCGG AGTTCACACG CTCAGGTGGA
TTAAATCAAA AGATCGACCA AATAAAGTCG ATCCCTTTTG TCCAAGACCT ACTGAATGTG
GCTCCAAGCC CAAAAGAAAC CGCCCAGTTT TCAGAGTCCT ATTATCAAGC GCTTCAAGCT
TTCAGAAGTA AACTCGATAT TGAGCCGGTA CGTAACACCC AATTAGTCAG AATTCGCTTT
CGTTCTACCG ATCCTAAGCT TGCTACAACA ATCGCCAACG CGGTCGGCCA AGCCTACATT
GACGCAAATT TTGAAGCCAA ATTGGTCGTT ACACAAAATG CGGCCACTTG GTTGACAAAT
AACTCACAAA AATTGGAGGA GCGATTACGT AACTCTGAGC AAGCGCTGCA AGAATTCTTG
TTAAAAGAAG GATTGATCGA TATAAACGGT ATTGATGAAA TTTACGCAAA TGAGCTAGAA
GAACTCACTC GCAAGCTAAA TGTCGCTGTC AATAAGCGCA TTGAAGCGCA GACGTTAATC
CAACTGTTAA AACGTAAATC CTCACAAAGT TTAGACAGCT TGCTGTCAAT TGATGAATTC
GCTAATCAAG CGCAGATCCG CGACCTAAAA TTATCGGAAG CTCAGGCAGC CAAAAATCTC
TCTGAGCTGG CACAGCGCTA CGGCCCCAAG CATGACCGAA TGATTCAGGC GAAAGCGCAG
CTCGCTGAAA TTCAATCAAG AACCCAGCAA CTCATTCGTG ACATTTCCTT CAGCAAGCAA
CAAGACCTTC TTGCTGCAAA GGCGCAAGAG GACATGCTTC GAGCAGAACT CGATAACAAA
AAGTCCGACT TCCAATCGTT AGGGTCACAA AAAGCGCGTT ACGAACAGTT AAAACGGGAG
GTTGAATCCA ATAAGGCACT CTATGAAGCG TTCTTAAATC GTGAGAAAGA GACCAACGCC
ACCAGCGACT ACAAAAATGT CACTGCACGT TTTACTGACA AAGCCATCAT TCCTCTATTC
CCGGTGGCAC CACAACGAAT CAAACTGGTA CTGATTGCCA CCTTTTTTGG CTTTGCCATT
GCTTGTGCGC TGGTCATCAT CTTAGAAACG ATGCGAGAAG TTATCCGAAG CACAGCCGAT
GTGCAGGAAA AACTTGGTGT TACGTGTTTA GGCGTGATTC CGATGGTCAA AAAACGCAAT
TTGCGTAAAA ACGGCGTCAG TTATACCGCG TATTTAGATG ATGAAGAAAA GCTATTTAGT
GAAGCTTGCC GCTCCGTCAG AACCTCGCTT CTGCTCAGAC TAACCAACAC GAAGCAAAAG
ATATTGCCCT TTACTTCTGC CATTCCAGAA GAAGGAAAAA CATCGACCAG TATCAATATG
GCGGTGTCGT TTTCAAAAAT GGAAAAGGTA TTGATCATCG ACTGCGATTT ACGCCGACCT
TCCATCGCAA AACGGTTTGG TATTGCTGAA TCAAGCCCAG GCTTAACGCA TATCCTGACT
ATGGATACGC CAATCAAAGA TTGTGTTACA CATATAGAAG AAGCCAACTT AGATGTATTA
CCGGCAGGCC TAATTCCGCC AAACCCACAG GAACTGCTAG CTTCTGAACG CTTTAAAAAG
TTGCTCGAAC ATTTTCAAAA TAAGTATGAC CGGATCATTA TCGATACACC GCCCCTACTG
TCAGTGAGTG ATGCACTTAT TCTTGGTCAG TATGCCAATG GTCTGATTAC CGTCATTCGC
TCAGAATCGA CAAAATCATC ACTGGTTAAC CTTGCGTTAT CTAAACAAAT ACAACACTCA
GTTCCATCTC TTGGCGTCTT AATCACACAA GCCAAGACTA AGGAAGGAGA AACGCTTTAT
GTCCAGAAAT ACGCCTACTA A
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| Protein sequence | MNGTHPNNLQ MNKVELIRFG HHFKAIKKNW LSIAAFTLLF SLTCTWYIYS KASIYQATAT
LLIQEEQKSA LSIEEVYGVD TTKKEYFQTQ IAILKSNHIA DKVIRELNLT QQPEFTRSGG
LNQKIDQIKS IPFVQDLLNV APSPKETAQF SESYYQALQA FRSKLDIEPV RNTQLVRIRF
RSTDPKLATT IANAVGQAYI DANFEAKLVV TQNAATWLTN NSQKLEERLR NSEQALQEFL
LKEGLIDING IDEIYANELE ELTRKLNVAV NKRIEAQTLI QLLKRKSSQS LDSLLSIDEF
ANQAQIRDLK LSEAQAAKNL SELAQRYGPK HDRMIQAKAQ LAEIQSRTQQ LIRDISFSKQ
QDLLAAKAQE DMLRAELDNK KSDFQSLGSQ KARYEQLKRE VESNKALYEA FLNREKETNA
TSDYKNVTAR FTDKAIIPLF PVAPQRIKLV LIATFFGFAI ACALVIILET MREVIRSTAD
VQEKLGVTCL GVIPMVKKRN LRKNGVSYTA YLDDEEKLFS EACRSVRTSL LLRLTNTKQK
ILPFTSAIPE EGKTSTSINM AVSFSKMEKV LIIDCDLRRP SIAKRFGIAE SSPGLTHILT
MDTPIKDCVT HIEEANLDVL PAGLIPPNPQ ELLASERFKK LLEHFQNKYD RIIIDTPPLL
SVSDALILGQ YANGLITVIR SESTKSSLVN LALSKQIQHS VPSLGVLITQ AKTKEGETLY
VQKYAY
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