Gene VEA_001288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001288 
Symbol 
ID8559600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1465924 
End bp1466577 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID646408957 
Productpotassium uptake protein integral membrane component KtrA 
Protein accessionYP_003288436 
Protein GI262396583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.91889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACT TTACAGTAAT TGGTTTAGGG CGATTTGGCG TTGCCGCCAG CTTAGAACTT 
ATTCATCTTG GACACACCGT AACGGGGGTG GATAGCGACC CGAAAATCGT CGAAAAATAC 
GTCGAAGAGT TAACGCAAGC GGTCATATGT GACGCAACAG ACGAAGGTGC ACTCAGAGAG 
TTAGCGTTAG CGAACAGTGA TGTGCTGTTG GTGGCGATTG GCGAAGACAT GCAAGCCAGT 
TTGTTGTGTA CTCTGGCGCT GAAAAATCTG GGTGTGAAAT CCATTTGGGT CAAAGCGAGC 
ACTAAAGCGC ACCACACCAT CGTGTCTAAG CTTGGTGTGC AACGCATTAT TCATCCGGAA 
GAGGAGATGG GCGTAAGAGT CGCGCAGGCA CTCAACTATC CGATGGTGAA CAACTATTTA 
GAAATAGGGC ATGGTTTGTA TGTGGTGGAA ATCCACGTTA AATCCAATCT GCACGATACG 
CCGCTTTCTA AGTTGATCAG CCGAGGCAGT TACAACATTC AGCCGATCTT GGTGAAGCGC 
GAAGAAGCCG TCTACACCAA TATCAATGAT GAGTTTGTGC TTAATGAGTT CGACACGTTG 
TTGCTTTGCG GTAGTCGCGC TGAGCTAAAG TACGTCGCTC CAAGGTTGGT GTAA
 
Protein sequence
MAHFTVIGLG RFGVAASLEL IHLGHTVTGV DSDPKIVEKY VEELTQAVIC DATDEGALRE 
LALANSDVLL VAIGEDMQAS LLCTLALKNL GVKSIWVKAS TKAHHTIVSK LGVQRIIHPE 
EEMGVRVAQA LNYPMVNNYL EIGHGLYVVE IHVKSNLHDT PLSKLISRGS YNIQPILVKR 
EEAVYTNIND EFVLNEFDTL LLCGSRAELK YVAPRLV