| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001287 |
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| Symbol | |
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| ID | 8559599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1465074 |
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| End bp | 1465772 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408956 |
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| Product | DNA-binding response regulator KdpE |
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| Protein accession | YP_003288435 |
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| Protein GI | 262396582 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.297598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTACA AAGTTTTAGT CGTGGACGAT GAGCCTCGCA TTCATACCTT TATTCGAATT
TCGCTGTCTG CTGAAGGGTT TGATTACATT GGCGCGAGTA CCATTGCAGA AGCCAAAGCG
TGTTTCGAAG CGCATTCGCC GCACGTCATT CTGCTAGATT TAGGCTTGCC CGACGGCGAT
GGGACGGAGT TTCTCACTAC GCTCCGTCAG ACCTATAAAA CGCCAGTGCT AGTGCTGACA
GCTCGCGATC AAGAAGAGGA AAAAATCCGC CTTTTAGAAG CGGGCGCGAA TGATTACTTG
AGCAAGCCTT TCGGCGTAAA AGAGCTCATC GCGCGCATCA AAGTGCTGGT TCGAGATTTG
GTGGATGAGC AAACCGTCGC TGATGAGCTG GTGGCTGGCC GAGTCAAAAT CATCAAAAGT
ACTCACCAAT TTTGGTTGGA TCAGAGGGAA ATTCCACTCA CCAAGAAAGA GTTTTCTTTC
ATTGAACAGT TGATTCTCAA GCCGGGAAAA CTCATTGAGC AAACTCATTT GCTATCGGTA
ATTTGGGGAA AAAGTCATGT CGAAGATACT CACTACTTAC GCGTGTTAGT GAGTCAACTA
CGCAAAAAAC TGAACGATAG TGCTGACGAA CAGCGACTAT TAAAAACCGA GCCGGGGCTG
GGTTATCGTT TAGTGCTTGA GACGTCCAAG CACCACTAA
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| Protein sequence | MSYKVLVVDD EPRIHTFIRI SLSAEGFDYI GASTIAEAKA CFEAHSPHVI LLDLGLPDGD
GTEFLTTLRQ TYKTPVLVLT ARDQEEEKIR LLEAGANDYL SKPFGVKELI ARIKVLVRDL
VDEQTVADEL VAGRVKIIKS THQFWLDQRE IPLTKKEFSF IEQLILKPGK LIEQTHLLSV
IWGKSHVEDT HYLRVLVSQL RKKLNDSADE QRLLKTEPGL GYRLVLETSK HH
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