| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001279 |
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| Symbol | |
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| ID | 8559591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1453595 |
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| End bp | 1454935 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408948 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_003288427 |
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| Protein GI | 262396574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATC AACTGCCAGC CGTTAATCAG CATCCGTCTG AAACCGTTTA TCGTTTTAGT
CCGCAAGCGA AACTAAGCTT TCGAAAGCCA ATTTTACTTG GTGTGGTGAC GCTAAGTATT
TTTCTTGGTG GCCTAGGCTA CTGGGCTGCG ACAGCGAAAT TAGAGAGTGC TGCAATTGCT
TATGGCGATT TGTCTGTTCT CACTAAGCGA CAAGAAATTC AACATCTAGA AGGCGGCATT
ATTGAAAAGC TGTACGTGCA GGAGGGAGAC TTGGTTGAAA AAGGTCAATT ATTAATTCAA
CTCTCTAAGC GACAAGCTAT GGCGAAGTTG GATTCATTAA GTGGTCAGTT TATTCATACT
CTAGCGAAGG AAAACCGTCT AAGTGCTGAG CTAGATGAAT TGCCAACGAT CGTATGGTCT
GATGATCTTG AAAGTATTCC TCGCGTCGAT ATCGTCCAAG AAGCTCAACT GGTTCAAAAC
AAGATCTTTG AAGCGAGAAA GCGATTCTTT GATAGTAAGC TGAGCATCAT TGAGCAGAGT
ATTTCTGGGG CAAATTTGGA GCTGGAAAAC CTCCAGCAAA CCAAAGTAAT TGAGAGAGAA
AGACTCAATT TTATCGCCGA AGAAATAGAC AGTAACCAAG CTCTAGTTCA AAAAGGCTTT
TCGGGTAAAT CCACCTTACT TCAACTCAAA CGTCTTGCGG CGGAAGTGCG GAGTACCTTA
AGTCAGTTAG ACAGACAATC ACTCACAGTA AGCAAAAGGT TGGATGAAAA CCAAGCGCAA
ATTGAAGAGT TGAAGCTTGA AAGACTGAAT GAGATTGTCG AGGAGCTACG AAACACCAAA
AAGGAAATCG TCGCCATCCG TGAAGAGTAT CGCTCAGCCC AAGATATTGT AGCGAGAACA
ACCATCAATG CACCTATTGC AGGCCGTGTG GTCAACATGC AGGTGTTTAC CGAAAAAGGT
GTGATTGGTT CGGGTGAAAC GCTATTAGAG TTGGTTCCTC AAGACGATAA GTTGTTAGTC
GAGGCTCGCG TGAATCCTCA GGATATCGAT TTAGTTAACC CAGGTCAGCA GGCGCATGTT
CGTCTGACCG CTCTGAATGC TAGAACGTTG GCACCATTAG ACGGCACGGT GTTAACGATT
TCTGCGGATA AGCTTTCACA AGAAAACCAA GAGGATTTTT ACCTCGCTAG AATTGCAATT
TCGCAAGAAG ATGTAGCCAA ACACCGCTTA ACTTCAGGAA TGAACGCGGA AGTGCTTATT
TTATCTGAAC CGCGAACGCC TTTAAGTTAT TTAATAAAGC CAATCACTGA AAGCATGAAT
CGCGCCTTTA GAGAGGAGTA A
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| Protein sequence | MSNQLPAVNQ HPSETVYRFS PQAKLSFRKP ILLGVVTLSI FLGGLGYWAA TAKLESAAIA
YGDLSVLTKR QEIQHLEGGI IEKLYVQEGD LVEKGQLLIQ LSKRQAMAKL DSLSGQFIHT
LAKENRLSAE LDELPTIVWS DDLESIPRVD IVQEAQLVQN KIFEARKRFF DSKLSIIEQS
ISGANLELEN LQQTKVIERE RLNFIAEEID SNQALVQKGF SGKSTLLQLK RLAAEVRSTL
SQLDRQSLTV SKRLDENQAQ IEELKLERLN EIVEELRNTK KEIVAIREEY RSAQDIVART
TINAPIAGRV VNMQVFTEKG VIGSGETLLE LVPQDDKLLV EARVNPQDID LVNPGQQAHV
RLTALNARTL APLDGTVLTI SADKLSQENQ EDFYLARIAI SQEDVAKHRL TSGMNAEVLI
LSEPRTPLSY LIKPITESMN RAFREE
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