| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001250 |
|---|
| Symbol | |
|---|
| ID | 8559562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1416569 |
|---|
| End bp | 1417519 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288398 |
|---|
| Protein GI | 262396545 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3272] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.618518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCTT CAATCAAAGT AGGTATCAGT TCTTGTGTTT TGGGTGAACG AGTTCGTTTT
GACTCTGGTC ATAAAGTCAG TAACTTTGTG ACTAAAGAGC TCAGCCCATA TTTTGACTTT
GTTTCGGTAT GCCCCGAAGT GGGTGTCGGA ATGCCAGTGC CGCGACCAAC AATTCGTTTG
ATTTCCGAAG AAGAGCGTGT AGCTCTAGTA GAAACTAAAA ATCCAGAAAA TGACCATACC
GATAATATGC TTGCTTACTC TGCTAACAAA GTGGAGGAGC TACAAAGCGA GCAACTTTGT
GGTTACATCG TCTGTGCCAA GTCTCCAACT TGCGGTATGG AGCGCGTCAA GGTTTATAGC
AAAAATAACG CAGCGAAAGA AGGCGTCGGC TTGTACACAC AAACGCTGAT GAAAAAAATG
CCTTGGTTGC CCGTCGAAGA GGATGGCCGA CTCAACGATC CTGTATTAAA AGAAAACTTT
ATTACCCGAG TATTTTGCTT GAACGACTTT TATGACTCGA TGGACGGAGA GCCAACTCGA
GGCAAAGTTA TCGATTTTCA TTCGCGCTAT AAGTTGACCT TGATGGCGCA TCACCCTGAG
TCATACCGCT CTCTTGGTCG TTTAGTTGCC GATGTCGCTA GCTATGAAAT CGAAGAATTC
TATCAAGAGT ATCGCTTAGG TCTTATGAAG GCACTTGCGA ATCGTGCTAG CCGAAAAAAC
AACACTAACG TACTAATGCA TTTACAAGGG TATTTTAAGC GCGCTTTAAC TAAAGACGAA
AAAGAAGAAT TAGCAACAGT AATTCATGAC TACCGCACTG GTACATTGCC ATTGTTAGCA
CCGTTGACAT TGATTAAGCA CTACTTAAAC ACTTACCCAG ATGAGTATTT AGCAAAACAG
AAGTTTTTAG AACCGTATCC GCAGGAGATG AGATTACGCT ATGGTTTGTA G
|
|---|
| Protein sequence | MESSIKVGIS SCVLGERVRF DSGHKVSNFV TKELSPYFDF VSVCPEVGVG MPVPRPTIRL
ISEEERVALV ETKNPENDHT DNMLAYSANK VEELQSEQLC GYIVCAKSPT CGMERVKVYS
KNNAAKEGVG LYTQTLMKKM PWLPVEEDGR LNDPVLKENF ITRVFCLNDF YDSMDGEPTR
GKVIDFHSRY KLTLMAHHPE SYRSLGRLVA DVASYEIEEF YQEYRLGLMK ALANRASRKN
NTNVLMHLQG YFKRALTKDE KEELATVIHD YRTGTLPLLA PLTLIKHYLN TYPDEYLAKQ
KFLEPYPQEM RLRYGL
|
|---|
| |