Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001244 |
Symbol | |
ID | 8559556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1408954 |
End bp | 1410084 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408913 |
Product | multidrug resistance efflux pump |
Protein accession | YP_003288392 |
Protein GI | 262396539 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAT TGCTGATTCT GACTTATACA GCCCTTTGTA TCGCCATTTT TAAAGTCTTT AATATTCCTT TGAACAAATG GACCGTACCT ACAGCCGTAC TTGGCGGCGT AGTGTTGGTG GGCACACTCG TCCTTCTTAT GAATTACAAC CACCCATTTA CTCAGTTAGG TAACCAAGTG TTCCCAACTA CGCCTATCGT CTCTGGTGTA CGTGGCCGCG TTGTGGAAGT GCCCGTTCAA GCGAACCAAC CGCTCAAAAC CGGCGATATT CTTTTCAAAA TCGATCCTGT GCCTTTTGAA GCAGAAGTCG CACGCCTTGA AGCGAAAGTG AAAGAAGCAA GCCAAGGTGC GTTGGGTTTA GAGTCTGACT TGAGAGAAAC AGAAGCGGCG GTTTTGAAAG CGCAAGCCGA TAGAGATAAA GCACAAAGAG AATTTAGCCG ATATCAAAGG GGCTTTGATC GCGGCGCATT TACGGAACAA GATTTAGATA CTCGACGCCA AGCGTACAAA GCGGCAGAAG CCATGCTAGA CGTTGCCATT TTGCAGCAAG AGCAAGCACA GATCGCATTA GAGTCGGAAA TCGGCGGTGA AAACACCCAA GTCGCGCAAC TTCTCGCAGA GCTGCGTAAA GCAGAGTTTA ACCTAGAGCA AACCGTCGTT CGTGCGCCAA CCGATGGTTA CGTTACGCAA TTGGCTTTGC GCCCTGGTGT GATGGCTGTG CCATTGCCGC TTGCCCCAGC AATGACCTTC GTGCATACCG AAGACATTAC GTACACGGCG GCGTTCAGAC AAAACTCGCT ACAACGTTTG AAGGCAGGCT TTGAAGCGGA GTTTATGTTC CGTGCGATAC CGGGCAAGGT ATTCCGTGGC GAAGTCATCG ACGTGATTCC AGCCATTGGT GAAAGCCAAA TTCAAGCCAG AGGTGCTCTG CTTGGTACCG ATGCCCTGCG CACAAGCGGA CGTGTATTTG CGAAGCTGAA AATCACGGAC GATTTGAGCG AATACCACCT ACCAATGGGT ACCGCGGTTG AAGTCGCCGT TTACTCAGAC AGCTTTACTC ACGTGTCAGT GATGCGCAAA GTGCTGATTC GCATGAAGAG CTGGCAGAAC TATTTGTACC TAGACCATTA A
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Protein sequence | MDLLLILTYT ALCIAIFKVF NIPLNKWTVP TAVLGGVVLV GTLVLLMNYN HPFTQLGNQV FPTTPIVSGV RGRVVEVPVQ ANQPLKTGDI LFKIDPVPFE AEVARLEAKV KEASQGALGL ESDLRETEAA VLKAQADRDK AQREFSRYQR GFDRGAFTEQ DLDTRRQAYK AAEAMLDVAI LQQEQAQIAL ESEIGGENTQ VAQLLAELRK AEFNLEQTVV RAPTDGYVTQ LALRPGVMAV PLPLAPAMTF VHTEDITYTA AFRQNSLQRL KAGFEAEFMF RAIPGKVFRG EVIDVIPAIG ESQIQARGAL LGTDALRTSG RVFAKLKITD DLSEYHLPMG TAVEVAVYSD SFTHVSVMRK VLIRMKSWQN YLYLDH
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