Gene VEA_001243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001243 
Symbol 
ID8559555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1408068 
End bp1408616 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content43% 
IMG OID646408912 
Productsubstrate-specific component MtsA of methionine-regulated ECF transporter 
Protein accessionYP_003288391 
Protein GI262396538 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT CTGCTAAAAC CGTTGTGGTT ATTGCAATTG GTGCTGCTCT TTACGGCATC 
GGTGGCTTAC CTATGTTTGG CATCCCTGTG TTTGCAAACA CAACGCTAAA ACCAGCCATG
GCAGTATTAG CATTGTTCTC AGTACTATTT GGCCCACTTG TTGGCTTTTT GGTTGGTTTT
ATTGGCCACT GGGTCACTGA CCTATTCGCA GGTTGGGGCG TATGGCTCAC TTGGGTACTT
GGTTCAGGTA TTGTTGGTTT GATTATCGGT CTATTCCCTT CTCTAACGCG CTACCGTTTA
GAGAAAGGCG ATTTCAATAT GAAAGACTTC GTGTTATTCG TAGTACTTGC GCTATTAGGC
AACGTATTTG GTTACGGTTG CTCTGCATTC CTCGACACGA TTTTATACGC AGAACCGTTC
ACTAAAGTGT TTACCCAGCT TTCAATTATC GCGATCGGTA ACACTATTCT TATTGCTATT
GTTGGCTTCT TCATTCTTAA GTCTGTCGCT AAACGTAACA AGCAAAGCCG TAACTTAACA
GAGGCTTAA
 
Protein sequence
MNLSAKTVVV IAIGAALYGI GGLPMFGIPV FANTTLKPAM AVLALFSVLF GPLVGFLVGF 
IGHWVTDLFA GWGVWLTWVL GSGIVGLIIG LFPSLTRYRL EKGDFNMKDF VLFVVLALLG
NVFGYGCSAF LDTILYAEPF TKVFTQLSII AIGNTILIAI VGFFILKSVA KRNKQSRNLT
EA