| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001232 |
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| Symbol | |
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| ID | 8559544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1397720 |
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| End bp | 1398679 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408901 |
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| Product | outer membrane protein OmpU |
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| Protein accession | YP_003288380 |
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| Protein GI | 262396527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0870457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AAACTTTAGC TGTAGCAGTG GCGCTAATGG CATCAGGATC TCAAGTTGTC
GCTTCAGAAC TATACAACCA AGATGGCACT TCTCTTGAGA TGGGCGGCCG CGCTGAAGCG
CGTCTTTCTA TGATGGATGG TAAGGCAAAA GACCGTACTC GCATCCGTCT TAACTTCCTA
GGCAAACAGG AAATCAATGA AAACCTATAC GGTGTTGGTT TTTGGGAAGG TGAGTTCGAA
ACAAAAGAAG AAGGTGCCGT AGATAACAAC AGTGATCTTG AAACTCGTTA CGCTTACGCA
GGCCTAGGCG GTAAATACGG TGAAGTAACT TACGGTAAAA ACGACGGTGC ATTATTCGTT
CTTACTGACT TTACCGATAT TATGGCTTAC CACGGTAACA CTGCAGCACT TAAGCTGCCT
GTATCTGACC GTACAGATAA CATGCTTTCT TACAAAGGCC AATTCGAGCA ACTAGCTGTA
CGTGCTAGCT ACCGCTTTGC TGATCGCACA ACAGATGCAA AAGGTTTTAC AGACAACGAG
GAAGATGGCT TCTCTCTATC TGGTATCTAC GCATTTGCTA ATACTGGTAT TGAACTAGGT
GCTGGTTATG CAGACCAAAA CGATAGTGAT GAGTTCATGC TTGCTGCTGC ATACTCTGTA
GGTGATTTCT ACTTCGCTGG TAACTACACA GGCGCAGACG TGGATGTTGC AGGTGAGTCT
GCGGATTACA AAGGCTACGA ACTAGCTGCA TCATACACTA TGGGTCAAAC TGTATTTACT
TCTACGTTCA ACAAAGGTGA GCTAGAAGAT GCTGATACTG TAGAAAACCT AGCTGTTGAT
GTTACTTACT ACTTCAAGCC TAACTTCCGT GGCTACGCAT CATACAACTT CGATCTAATG
GATAACGAAG GCGCTGATGA AAAAGATGAG CTAGCGCTAG GTCTACGTTA CGACTTCTAA
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| Protein sequence | MKLKTLAVAV ALMASGSQVV ASELYNQDGT SLEMGGRAEA RLSMMDGKAK DRTRIRLNFL
GKQEINENLY GVGFWEGEFE TKEEGAVDNN SDLETRYAYA GLGGKYGEVT YGKNDGALFV
LTDFTDIMAY HGNTAALKLP VSDRTDNMLS YKGQFEQLAV RASYRFADRT TDAKGFTDNE
EDGFSLSGIY AFANTGIELG AGYADQNDSD EFMLAAAYSV GDFYFAGNYT GADVDVAGES
ADYKGYELAA SYTMGQTVFT STFNKGELED ADTVENLAVD VTYYFKPNFR GYASYNFDLM
DNEGADEKDE LALGLRYDF
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