| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001225 |
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| Symbol | |
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| ID | 8559537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1387340 |
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| End bp | 1388239 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408894 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_003288373 |
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| Protein GI | 262396520 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.338504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAG ACGACCTAAT CCTATTTTCT CAAGTAATCG AACTGGGCAG TTTTAGTAAG
GTTGCAGAAG CAAATAACCT TACAAATTCG GTAGTTAGCA AAAGAATGGC AAGGTTGGAG
GAAGAGATAG GGGCGCAGCT ATTATATCGA ACAACGCGTA AATTGACCTT AACCGAAGCA
GGTAAGGTGT TACTCCACAG TGCTAAAAAT GTGAAGCAGG CCACTCAGGA GGCTATGGAC
GCTGTTGCAG GCTTTGGAGA GAATGTGAGC GGTCACATAA AAATGTCCGT GCCTTGTATC
TCTGGAGATT TGATACTTGC TGATGCCGTT GCGGAATTTT GTAACCTTCA TCCGGGTCTG
ACCGTGGACA TGTCATTGGA TAACCGCTTT GTCGATTTGG TGGCTGATGG TTACGATTTA
GTCATTCGAA CTGGCTACCT AGCCGATTCC AGTTTGATCG CACGACATAT TCTCGATTCC
CAATGGGTGG TATGCGCGTC CCCTTCATAT ATCGCTAAAA ATGGGAAGCC GATCGAGCCG
ATTGATCTCA CCACGCACAA TTGTCTGCAA TACGCTTACC AAACCACAGG TGCAACAGAC
TGGGAGTTTA AAGGCGAAGA TGGTAATTAC ATCGTCAAAG TATCGGGCTG CTTTTCTACT
GATAACGCGA CCGCATTACG TAAAGCCGCT CTGGGCGGCC ATGGTATAGC TTACGTCCCG
CGATGCTTGG TGTATCACGA TATTCGCAAT GGCCAACTGG TGGATATTTT TCCTGAACTA
GTGGGTAAAA AGTTGGGTAT CTATGCGGTG TACCCGTTTA CTCGTCAACC ACCGAATAAA
GTGAAACTGC TTATTGAGCA CATTCGTGAT CGTTACTTAA CGATATCTCA TTATTTCTAG
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| Protein sequence | MRADDLILFS QVIELGSFSK VAEANNLTNS VVSKRMARLE EEIGAQLLYR TTRKLTLTEA
GKVLLHSAKN VKQATQEAMD AVAGFGENVS GHIKMSVPCI SGDLILADAV AEFCNLHPGL
TVDMSLDNRF VDLVADGYDL VIRTGYLADS SLIARHILDS QWVVCASPSY IAKNGKPIEP
IDLTTHNCLQ YAYQTTGATD WEFKGEDGNY IVKVSGCFST DNATALRKAA LGGHGIAYVP
RCLVYHDIRN GQLVDIFPEL VGKKLGIYAV YPFTRQPPNK VKLLIEHIRD RYLTISHYF
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