Gene VEA_001219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001219 
Symbol 
ID8559531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1380283 
End bp1381254 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content46% 
IMG OID646408888 
Productsigma-fimbriae tip adhesin 
Protein accessionYP_003288367 
Protein GI262396514 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGGT ATTCTCGTTA TCTTTGGTTT TTTCTTCTTT TTATATCGTC CGGTAACATG 
GCTTGTGAGC TCACTGCGCC GACGCCTTTG ATTCAATTTG GAAGCGTTTC CTCGTTTACC
GTTTCAACTA TTCAGCAACA GAGCTCAGCC CAGCCTCATG CTGGGATAAC GTGTGACTTT
TCTACACTTG TTTCTTTGTT GAGTGGCGAT TATGTGTCTG CAACGTTTAA CAGCACTAAC
GATGGGCGGT TGCTTAATGC GGCGGATATC AGCTCGGAAC TTAGCTATCA GATTTTTGGA
GACCCAAGCC TTTCGCAAGA GTACATTTTT GGCCAAACTT ACAATTTTTT TGAAATTGGG
CTGCTCGATT TACTAGGTTT ATTTGGCACT CAAGCTGAAT TTCCGCTTTA TGCCCGGACA
GGAGCTGGTA GTAATCTCTC TGCAGGGACT TATCGAGACC AAATTACGGT GTCTTGGATT
TGGAATTATT GCTCAGGAAT TGGAGTTGGA GGCGTATGTC TTGGGCGAGA AACAGGCAAT
GCACAAAGCT TGATTACGGT AGAGTTAGAA GTCACTCCCG ATTGTATGAT CACGGCGCCA
GATATTAATT TTGGTTCATC ACCATTGGTG GCAGGTTTTG ACCCTGTCAG TCAGGTTATA
TCATTAACCT GTACCAAGAA CAGTGCTTTT ACCATTGGTT TAAACGACGG TGTGAATGCC
TCCGGAGGCC AACGACGCAT GGCATCTGGC GGTAACTATT TGGAGTATGA AATCTATAAA
TCCTCATCGA CGGAGCGGTG GGGGGGTACT GGTTCTGAAC GTCGTGAACA GAGCGATGTG
GATACGGGTG ACACCATTCC CGATGGCATC ACTCCGCAGA ACTTCAATTA TCGCGCAGAG
ATAATAACAA GCCAAACCAC CCCACCATCT GGCACTTATA CCGACTCGAT AATCGTTGAT
GTTCAATTTT GA
 
Protein sequence
MSRYSRYLWF FLLFISSGNM ACELTAPTPL IQFGSVSSFT VSTIQQQSSA QPHAGITCDF 
STLVSLLSGD YVSATFNSTN DGRLLNAADI SSELSYQIFG DPSLSQEYIF GQTYNFFEIG
LLDLLGLFGT QAEFPLYART GAGSNLSAGT YRDQITVSWI WNYCSGIGVG GVCLGRETGN
AQSLITVELE VTPDCMITAP DINFGSSPLV AGFDPVSQVI SLTCTKNSAF TIGLNDGVNA
SGGQRRMASG GNYLEYEIYK SSSTERWGGT GSERREQSDV DTGDTIPDGI TPQNFNYRAE
IITSQTTPPS GTYTDSIIVD VQF