Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001219 |
Symbol | |
ID | 8559531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1380283 |
End bp | 1381254 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408888 |
Product | sigma-fimbriae tip adhesin |
Protein accession | YP_003288367 |
Protein GI | 262396514 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGGT ATTCTCGTTA TCTTTGGTTT TTTCTTCTTT TTATATCGTC CGGTAACATG GCTTGTGAGC TCACTGCGCC GACGCCTTTG ATTCAATTTG GAAGCGTTTC CTCGTTTACC GTTTCAACTA TTCAGCAACA GAGCTCAGCC CAGCCTCATG CTGGGATAAC GTGTGACTTT TCTACACTTG TTTCTTTGTT GAGTGGCGAT TATGTGTCTG CAACGTTTAA CAGCACTAAC GATGGGCGGT TGCTTAATGC GGCGGATATC AGCTCGGAAC TTAGCTATCA GATTTTTGGA GACCCAAGCC TTTCGCAAGA GTACATTTTT GGCCAAACTT ACAATTTTTT TGAAATTGGG CTGCTCGATT TACTAGGTTT ATTTGGCACT CAAGCTGAAT TTCCGCTTTA TGCCCGGACA GGAGCTGGTA GTAATCTCTC TGCAGGGACT TATCGAGACC AAATTACGGT GTCTTGGATT TGGAATTATT GCTCAGGAAT TGGAGTTGGA GGCGTATGTC TTGGGCGAGA AACAGGCAAT GCACAAAGCT TGATTACGGT AGAGTTAGAA GTCACTCCCG ATTGTATGAT CACGGCGCCA GATATTAATT TTGGTTCATC ACCATTGGTG GCAGGTTTTG ACCCTGTCAG TCAGGTTATA TCATTAACCT GTACCAAGAA CAGTGCTTTT ACCATTGGTT TAAACGACGG TGTGAATGCC TCCGGAGGCC AACGACGCAT GGCATCTGGC GGTAACTATT TGGAGTATGA AATCTATAAA TCCTCATCGA CGGAGCGGTG GGGGGGTACT GGTTCTGAAC GTCGTGAACA GAGCGATGTG GATACGGGTG ACACCATTCC CGATGGCATC ACTCCGCAGA ACTTCAATTA TCGCGCAGAG ATAATAACAA GCCAAACCAC CCCACCATCT GGCACTTATA CCGACTCGAT AATCGTTGAT GTTCAATTTT GA
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Protein sequence | MSRYSRYLWF FLLFISSGNM ACELTAPTPL IQFGSVSSFT VSTIQQQSSA QPHAGITCDF STLVSLLSGD YVSATFNSTN DGRLLNAADI SSELSYQIFG DPSLSQEYIF GQTYNFFEIG LLDLLGLFGT QAEFPLYART GAGSNLSAGT YRDQITVSWI WNYCSGIGVG GVCLGRETGN AQSLITVELE VTPDCMITAP DINFGSSPLV AGFDPVSQVI SLTCTKNSAF TIGLNDGVNA SGGQRRMASG GNYLEYEIYK SSSTERWGGT GSERREQSDV DTGDTIPDGI TPQNFNYRAE IITSQTTPPS GTYTDSIIVD VQF
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