| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001217 |
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| Symbol | |
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| ID | 8559529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1377121 |
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| End bp | 1377879 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646408886 |
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| Product | pilus assembly protein chaperone PapD |
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| Protein accession | YP_003288365 |
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| Protein GI | 262396512 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TAATAAAAAG ACTGGTTTTC GTCATTATTT TCTTATCAAC GTTAACTTCA
CAGGCCTATG CTAATTCTCT CCTTATTTGG CCTATTTACC CTAAAATATC TTCTGAATCG
AATGCGACAT CAATTTGGAT GGTTAATCAA GGCACTGAAG ATTTTTATTT GCAGGTTCGT
ATTTTTCAGT GGGGACAGAA GGATGGGCAG GATACATATG CGCAGCAACG ACAACTGATA
GCTACGCCTC CTTTTGTGAA AATTGCACCT GGTGCCAAGC AACTTATTCG TATATTAAAT
CAAGATGGAG CGCTTTCGAA TAAAGAGTAC GCATATCGTA TTATCATCGA TGAACTCCCG
CCAGCTAAAG GGCCTCAAGA TGAAAATAAA GAAAATGATC TGGCAGTAAA AGTGAGAATG
AGATATTCCA TACCATTGTT TATGTACGGT AAAGGGATGA AAAGACAATC CCAAGGAACA
AATGAAGTTT GGAGCGGACT ACAGGCAAAG ATTATAAAGA GTAAAGATAA GAACCTTATT
CATATAGAAA ACACCAGTAA TCACTATGTC AGATTAGTCA ACCTAGCAGT GACCGCGCCA
AACCAATCGC CTTTTATCGT TTCGAAAGGG TTAGCAGGGT ATATATTACC TGAGCAATAT
AAAACGTGGC CTATTTCTTA CTCCAATATG AAAAATATAA AAGTAAAGGC GGATATTGAA
GGTAAGCGTT ACGTTATTCC ACTCGAACAA AATGAATAA
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| Protein sequence | MDLIIKRLVF VIIFLSTLTS QAYANSLLIW PIYPKISSES NATSIWMVNQ GTEDFYLQVR
IFQWGQKDGQ DTYAQQRQLI ATPPFVKIAP GAKQLIRILN QDGALSNKEY AYRIIIDELP
PAKGPQDENK ENDLAVKVRM RYSIPLFMYG KGMKRQSQGT NEVWSGLQAK IIKSKDKNLI
HIENTSNHYV RLVNLAVTAP NQSPFIVSKG LAGYILPEQY KTWPISYSNM KNIKVKADIE
GKRYVIPLEQ NE
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