| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001186 |
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| Symbol | |
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| ID | 8559499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1350630 |
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| End bp | 1352339 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408857 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003288336 |
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| Protein GI | 262396483 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCG GCTCAGCACA GACATTTTCT ACTGCGAATA GCATGGACGA TGTAACAACG
AAGCTGAAGC AAATCTGGTC GAGTAGCCAG AGAAACCTAG TGTTATCTGC CGTACTCGCT
GCGATTGTTG CGGCAATCAT TGTGGTCGCT CTTTGGAGTT CCTCACAAAG CTTCCGTCCA
CTGTATAGCC AACAAGAACG TTTTGATATC GGAGAGATTG TCTCGGTATT AGAAAGTGAA
GGTGTGAGCT ACCGTATGCA AGAGCAAAAT GGCCAAGTTC TTGTGCCAGA AGGCGAAGTT
GCGAAAGTTC GCATGTTGCT TGCGTCAAAA GGTGTTAAAG CCAAACTGCC GACAGGTTTG
GATTCGCTTA AAGAAGACAG CTCTCTCGGT ACAAGCCAAT TTATGGAAAC GGCGCGTTAC
CGTCATGGTT TAGAAGGTGA GTTAGTACGC ACTATCATGT CTCTGAATTC AGTGGCGAAT
GCGCGTGTTC ACTTAGCTAT TCCTCGTCAA ACCTTATTTG TTCGTCAAAA CAGCGAGAAC
CCTTCAGCGT CAGTGATGCT TGAGCTGAAA CCTGGCGAAG ACCTCAAGTC TGAGCAAGTT
GAAGCAATCA TCAACTTAGT GGTTGGTAGC GTGACGGCGA TGAAGCCTGA ATTTGTATCT
GTTATCGACC AATATGGCCG TTTACTCAGT GCAGATGTTG CTTCGGCGGA AGCAGGTAAA
GTCAATGCAA AATACCTTGA ATATCAAAAG AACGTTGAGA AGCAGATCAT TCAACGCGCA
GCAGACATGC TTACGCCAAT TGTGGGTCCG AGTAACTTCC GTGTGCAAGT CGCTGCTGAT
ATGGACTTTA GCCAAGTTGA AGAAACGCAA GAGATTTTGG ATAACGCACC TGTCGTACGT
AACGAGCACA CCATTCACAA CAACTCAGTT GACCAAATTG CGCTAGGCGT ACCAGGTTCT
CTAAGCAACC AACCGCCGGT AACTGGTGAA GAAGTAGAAA CGAACGATAG CCAAAACACC
AACGCACGCT CTGAAGTAAA CCGTCAGTAT GCAGTGGGGA GTAGTGTTCG TCGTACTCAA
TACCAACAAG GTCAAATTGA GAAAATGAGC GTGTCGGTAC TGTTGAACTC GAAAGCCTCT
CCGGATGGTG TTGCTTGGAG TGAAGCAGAT AAAGAGCAGA TTTCAAATAT GATCATGGAT
GCTGTCGGTA TTTCTGCGGC ACGAGGTGAC AGCTTAAGCT TGATGAGTTT CAACTTCACT
CCAATTGAAA TTGATGCGCC TCCTGCGCTG CCGTGGTGGC AAGACCCTAC AGTACAGCAG
CCAATACGTT ACGTTATCGG TGGTTTGTTA GGCTTGGCGA TGATCTTCTT CGTACTACGC
CCATTGATCA TGCACCTCAC AGGCGTTGAT AAGCCAGTAC CAGAGTTAGA CTTTGCAGAG
CCGCAAGAAG AGCCTGATTA TGACAACCTG CAAACGCGTG AAGAGCGTGA GCATGAAGAA
GTGCTTGATC GCCGTCTATC AGAAAAAGGT ATCTCAGCCT CTTCCGGCTT AGATGTAAAC
AGCGACATGC TGCCTCCAGC CGGTTCGCCA CTAGAGATTC AATTGAAACA CCTACAGCTT
ATTGCCAATG AAGAGCCAGA GCGCGTAGCC GAAATACTGA AACAATGGGT AAACATCAAT
GAACACAGTT CCATCAAAGC AGACGCTTAG
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| Protein sequence | MTSGSAQTFS TANSMDDVTT KLKQIWSSSQ RNLVLSAVLA AIVAAIIVVA LWSSSQSFRP
LYSQQERFDI GEIVSVLESE GVSYRMQEQN GQVLVPEGEV AKVRMLLASK GVKAKLPTGL
DSLKEDSSLG TSQFMETARY RHGLEGELVR TIMSLNSVAN ARVHLAIPRQ TLFVRQNSEN
PSASVMLELK PGEDLKSEQV EAIINLVVGS VTAMKPEFVS VIDQYGRLLS ADVASAEAGK
VNAKYLEYQK NVEKQIIQRA ADMLTPIVGP SNFRVQVAAD MDFSQVEETQ EILDNAPVVR
NEHTIHNNSV DQIALGVPGS LSNQPPVTGE EVETNDSQNT NARSEVNRQY AVGSSVRRTQ
YQQGQIEKMS VSVLLNSKAS PDGVAWSEAD KEQISNMIMD AVGISAARGD SLSLMSFNFT
PIEIDAPPAL PWWQDPTVQQ PIRYVIGGLL GLAMIFFVLR PLIMHLTGVD KPVPELDFAE
PQEEPDYDNL QTREEREHEE VLDRRLSEKG ISASSGLDVN SDMLPPAGSP LEIQLKHLQL
IANEEPERVA EILKQWVNIN EHSSIKADA
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