Gene VEA_001185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001185 
Symbol 
ID8559498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1350231 
End bp1350587 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID646408856 
Productflagellar hook-basal body complex protein FliE 
Protein accessionYP_003288335 
Protein GI262396482 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTC AACCTACTCA TGCGGTCTCG GCAGAGCAAC TTATGTTGTC AAAAATGCAG 
GCGATGCAGG CACAAGTGCA GCCGCCAGAG TTTATCGTGA GTGCAAATCC TTTAGATCAA
CAATCACTAA ACGCACCATT ATCGTTCTCA CAAGCGATGA CAAATGTGTT GGATACAGTG
AATCAACATC AATCAGTGGC TAGTCAAAAA ATGACGGCCG TAGAAACAGG AAAAAGTGAT
GACCTAGTTG GTGCGATGGT CGCTAGCCAA AAAGCCAGCT TATCATTTAA TGCTTTGATG
CAAGTGCGCA ACAAAGTCGT GACCTCATTT GAAGATATTA TGAAGATGCC GGTGTAA
 
Protein sequence
MASQPTHAVS AEQLMLSKMQ AMQAQVQPPE FIVSANPLDQ QSLNAPLSFS QAMTNVLDTV 
NQHQSVASQK MTAVETGKSD DLVGAMVASQ KASLSFNALM QVRNKVVTSF EDIMKMPV