Gene VEA_001183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001183 
Symbol 
ID8559496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1347865 
End bp1348884 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content40% 
IMG OID646408854 
Productputative sodium-type flagellar protein MotY precursor 
Protein accessionYP_003288333 
Protein GI262396480 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCT ATGCCAGTTA TCACGGCTTA GTGGCATATT TAATTAAATT GATAAGGTCA 
TGGAATTGTA AGATATACAT GATCCCTAAC GGTTTAATAA ATTGTAAAAT ATTTATTTTT
GTCAGTTTGC TAGTGTCTAA GGTGACATAT TCAGGTGAGG TTGTGACCAT CCCCATGGAC
CTTTCAAAGT GGACATATAA AGGAAACAAC TTTGAATGCA ACTTATTGCA CTCAAGCACG
CCGTATGGGA AGTTTTATTT CCGTTCGGAA CCTAACAATA AAACTTATTT TATTTCCGAT
ATACATTATG AAAATAATAA ATGGAAAACG ATTGCTCTAA TAAGTCAAAG TGCTCCTTGG
TCTGGTGAGC TTTATAGAAA AGAGTTTGCC ACCCTTGATT TTACTAAGCC ATCCCAACGA
TTTGTCTTCA GCAAAGGTGC TGATGAACTC ATGGATTCAA TTGCTGCTGG TAATTGGGTG
ACGTTGTCAC TAAAGGGAAG TAACGCTTCC TCTTTGTCAG AGATTGTGAT TCCGACTATT
CAAATTCAAA ACGCGCTCAA GTCATTTAAT GCCTGTCGAG CGCGTTTGCC TAAGCTTTCG
TTTTCAGAGG CACGAAATCT TGTTCTGTCT TTTGACTTTG GTCAGAAGGT GCTAAGTCGT
AAGCAGCAAG AAACGCTCGC AGCGTTAAAT AGCTATGTAT CTGTTGATGA TCGCGTGACC
AAGATTTTAA TTGATGGCCA CACCGATAAC GTTGGTTCTA GTTTGGCGAA CCTTTCAGTA
TCACGTACTA GAGCAGAGCA AGTTGCCGAG GCCTTAGTTG AACTTGGTAT TGATAAATCG
ATGATCGAAA CAAGAGCGCA TGGTTCTCGT TACCCAATTG CCAGCAATAA TTCGACGAAG
GGCCAAGCGA AAAATCGACG TGTAACGTTG CGCCTAGTTA GAGATAACGA GCGAACGGCA
GTGAAACACC ACCCTGATGT ACAACAACAA AATCAACAAA CGAAAGTTAA GGTTCAATGA
 
Protein sequence
MISYASYHGL VAYLIKLIRS WNCKIYMIPN GLINCKIFIF VSLLVSKVTY SGEVVTIPMD 
LSKWTYKGNN FECNLLHSST PYGKFYFRSE PNNKTYFISD IHYENNKWKT IALISQSAPW
SGELYRKEFA TLDFTKPSQR FVFSKGADEL MDSIAAGNWV TLSLKGSNAS SLSEIVIPTI
QIQNALKSFN ACRARLPKLS FSEARNLVLS FDFGQKVLSR KQQETLAALN SYVSVDDRVT
KILIDGHTDN VGSSLANLSV SRTRAEQVAE ALVELGIDKS MIETRAHGSR YPIASNNSTK
GQAKNRRVTL RLVRDNERTA VKHHPDVQQQ NQQTKVKVQ