Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001172 |
Symbol | |
ID | 8559485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1335598 |
End bp | 1336935 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646408843 |
Product | flagellar hook-associated protein FliD |
Protein accession | YP_003288322 |
Protein GI | 262396469 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCAT TAGATCCAAT TACAATGGCT ACTAAATTTG CCACTTTTGA CGTTCAACCG TTTCAACAGC GCTATCAGCT ACAAGCCAGC AAATATCAAG CGCAACTTTC CGCTCTAGGT AAAGTTGAAA CGGCATTACG AGACTTTCGT AATTCGTTAA ACGAAATGAA CAGCAGCACA AACACCATCA TTAAGAACAG TGCAACCCTA TCTCAGGAAG GTTACTTTAC AGCCAGTGCA GATGCTAAGG CCCTCACAGG CAACTACCAA ATTTTTGTTG AGCAAGTTGC CACGTCTCAT CAAGTCTCTA CAGGGATGCC TGCTGATCTA GAAGCAACAA CTGAAGTCCC AACAACTGGC TCTCTCGAGT TCACGATCAA TGGCGAAACA ATGACGCTAG ATCTATCGAC TGTTGATTCA GACGGTGATG GCACAGCAAC AGTCAGTGAC TTAGCAAAAG CAATCAACAA CAACAGCGAT AACCCTGGAG TAAACGCCAC CTTAGTTCGC TCAAATGGTC AAACTCACTT TATGTTATCA AGCACTGAAA CTGGTGTTGC TAACCAAATC AACGTATCGG CGTCTGGTAC TGGCCAAGCC TGGTTTGAAG ATGCATTCAC AAATCTAAAC CAAATTAGCG CCCCGCAAGA TGCTGTAATG TGGTTGGGAG CTAAAGACTC TGGTCTCAAA CTGACGAACG CAAGCAATAC ATTTGAAGGT GTAATCGACG GTGTAGATAT TACTCTAACC AAAGCTCAAG CTTCTGGTGA AACACCTGTT GGCCTTGATA TAGGCTCTGA CAGCGAAGCA ACTAAAGAGC AATTGGATAA GTTTGTTGAC GCATATAACA CTCTTATTGG CGCAATGAAC CAGCACACCC AAATAGGTAG TGAAGACAAA AAACGTGGAG TGTTAGCAAG TGATCCAACA CTTCGCTCCA TTGAGAGCCA ATTAACTAAT TTGGTTCGAG GGGAACACGG TGGTATGCGT CTGAGTGAAA TCGGTGTGAG CTTGGATCGT GATGGGAAAA TGAAAGTCGA CCACGAAAAA TTCGCCGAAG TTCAAAAGAA TAACAGCGTG GGCTTGGAAG CAATGTTTAA TGGCGACGAT GCCTTACTTG ACTCAATGGA CGCGATGATT GATCCATTTC TGAAGTTTTC ATCAGGCGCA TTCAAATCCC GTAAAAATGC GCTTCAAGCT AACTTGGATC GCATAGAAGA TAAACAATCT ACATTAGAGC GTAAATACGA TATGTCGTAC AAACGCTACA TCAAACAGTT CACACAAATG AACGCGTTAA TGACCCAAAT GAACCAAACC ATGTCGATGT TTGGCTAA
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Protein sequence | MSSLDPITMA TKFATFDVQP FQQRYQLQAS KYQAQLSALG KVETALRDFR NSLNEMNSST NTIIKNSATL SQEGYFTASA DAKALTGNYQ IFVEQVATSH QVSTGMPADL EATTEVPTTG SLEFTINGET MTLDLSTVDS DGDGTATVSD LAKAINNNSD NPGVNATLVR SNGQTHFMLS STETGVANQI NVSASGTGQA WFEDAFTNLN QISAPQDAVM WLGAKDSGLK LTNASNTFEG VIDGVDITLT KAQASGETPV GLDIGSDSEA TKEQLDKFVD AYNTLIGAMN QHTQIGSEDK KRGVLASDPT LRSIESQLTN LVRGEHGGMR LSEIGVSLDR DGKMKVDHEK FAEVQKNNSV GLEAMFNGDD ALLDSMDAMI DPFLKFSSGA FKSRKNALQA NLDRIEDKQS TLERKYDMSY KRYIKQFTQM NALMTQMNQT MSMFG
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