Gene VEA_001171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001171 
Symbol 
ID8559484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1335191 
End bp1335577 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID646408842 
Productflagellar biosynthesis protein FliS 
Protein accessionYP_003288321 
Protein GI262396468 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.329244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATGG ACTCTGGCTA TGACTCGTAC CAGCAAGTAG ACCTCAACGC GCAAGCGGCA 
GCAGCAAACC CACACCAATT AGTCATTATG TTGATCGATG GCTTACTTGA TGAAGTTGAA 
CGTATTCGTG GCCATTTGGC TGCGAATCGC TTGGCGGAGA AAGGTAACGG AATCAACAAA 
TGTATGAACA TCTTAATTGG GCTCACAAGC GCTCTAGATG ATGAGAATGG TGGCGAAATT 
GCTGAAAATT TACGCCAGCT GTATGACTTC TGCCAAGTTG AGCTTTATTA CGCCAGCGTG 
CAGAACGATG CGAATCGCTT GGTTAATGTC GAGCGTGTAA TGGGTAATAT TCGTGAAGGT 
TGGATGAATT TTGGACAACA AGCATAA
 
Protein sequence
MLMDSGYDSY QQVDLNAQAA AANPHQLVIM LIDGLLDEVE RIRGHLAANR LAEKGNGINK 
CMNILIGLTS ALDDENGGEI AENLRQLYDF CQVELYYASV QNDANRLVNV ERVMGNIREG 
WMNFGQQA