| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001167 |
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| Symbol | |
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| ID | 8559480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1332553 |
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| End bp | 1333281 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408838 |
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| Product | RNA polymerase sigma factor for flagellar operon |
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| Protein accession | YP_003288317 |
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| Protein GI | 262396464 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACA TGAATATACA AGACACCTAT ACCACAGAAG AGGAAGTGAC GACACCATCA
CGCCCAATTG ACGAAAATGC ACTGCTGCAA CGTCATCAAG TTATGGTGAA ACGCGTCGTT
AACCAGCTAC GTGTTCATGC CACTTCTCAC TGTAGTATTG AAGATATGCA GCAAATTGGC
CTTATCGCTC TAGTTGAAGC TGGACGCCGA TACGGCGATG TTGACGATCC TCATTTCCCT
GCCTTTGCCG TGTGTCGCGT TCGAGGTGCA ATTTTAGACG AATTACGCCG GCTAGATTGG
CGCTCACGTA AAACTCGCCA ACAGGCTCAC GAACTCAATG ACGTGACTCG AGATCTCACA
CGCTCTTTAG GTCGGATGCC CACGGATGCA GAAATCATCC AAGCTTTGGG GACGAATGAG
CAGGACTATT ATAACCGCCA AAATGCCGCC CTTGCGGGAG AGATGCAAAG CCTTGACCAA
CTGATGGAAA GCAGTGGTGA TAGTTATATT GGCGGGCAAT ATGATGGCAT GGAACATGAG
CATATTCGTC GCAGTTTAGA TAGCGCTTTA GGCAAATTGC CGAAGCGTGA TCAATTGCTG
CTTACTCTGT TCTATCAACA TGAACTCAAC TTACACGAAA TAGCTCTGGT ATTGGATCTG
ACACCACCTC GTATATGTCA GCTTCACAAA CAAGCGCTGA AACAACTCAA CCAATTAATG
TCCTCTTAG
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| Protein sequence | MLDMNIQDTY TTEEEVTTPS RPIDENALLQ RHQVMVKRVV NQLRVHATSH CSIEDMQQIG
LIALVEAGRR YGDVDDPHFP AFAVCRVRGA ILDELRRLDW RSRKTRQQAH ELNDVTRDLT
RSLGRMPTDA EIIQALGTNE QDYYNRQNAA LAGEMQSLDQ LMESSGDSYI GGQYDGMEHE
HIRRSLDSAL GKLPKRDQLL LTLFYQHELN LHEIALVLDL TPPRICQLHK QALKQLNQLM
SS
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