| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001165 |
|---|
| Symbol | |
|---|
| ID | 8559478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1330693 |
|---|
| End bp | 1331685 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646408836 |
|---|
| Product | Flagellar motor rotation protein MotB |
|---|
| Protein accession | YP_003288315 |
|---|
| Protein GI | 262396462 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC AAGAGCATGT AGTGTTCAAA CGTGCCAAAG CACACAGCCA TGATGAACCT
CATGGCGGCG CGTGGAAAGT CGCGTTTGCT GACTTCATGA TCGCCCTAAT GGCGCTGTTT
CTTGTGCTTT GGGTTATGCA GGTGGTAGAC AAAGAAGAGC GTAAAGCAAT TGTCGCCCAC
TTACATAGCT CAAGCGTATT CGACAAGAGT TACGGTAATC CATTTGATAC TTCACAAAGT
ATCTCTCCTA TTGACTTGGC ACAGGACTCT TCTGTGCCAA GTAAACACAA TTCCAACCAC
GTGGTAAGCT CATACTTTCG AGGTGACGGC GATGGGCCAG AAATCGACTC GTTGATTCCT
GGTAACTTCG ATACTCAGGA GCAACTTGCA GCGTTGGCGA AAGTCATTGA ACGAATGACC
GCTCAGATTA ACGCACAAGG AAATGTCAAC GTCACCGTGA CCCCACAAGG CCTACGTATC
GTCCTTCAAG ATGATTACAA ACAGCATATG TTCAGTCGTG GTGGCGCAGA GCTGACCCCT
TTCTTCGAAG ACTTATTACT TGCACTTGCG CCTGTATTTC AGCGTGTGAA CAACCCACTG
ATCATCAGCG GACATACGGA TGCGATTCCA TTTAAAAAAC GCTTTGGTCG TCAATCAAAC
TGGGCGCTAT CTGCATCTCG AGCTGATGTC GCAAGAAATA CGCTGGTTGA AGGTGGCATG
CCGGATGATC GAGTCATGCA GGTCACAGGC ATGTCGGATA GAGCACTGCT TAACCCTGAT
GAACCAGATT CAAGCGAAAA CCGCCGTATC GAGCTGTTCG TTTTAACGAC GCCAGCAGCC
AAAGTACTCG AAACTCTTTT TGGTAACCAC CAAGAAAGTG AACTGCAAAA AGCGAAAGAT
AAAGCCGAAT TTAACCAACC AGTCATTCGA CAAGAAGTCA TCAATTACTC GGGTGATACG
GCCACCAACG AAGTAAATAT TCAAGAATTA TAA
|
|---|
| Protein sequence | MQKQEHVVFK RAKAHSHDEP HGGAWKVAFA DFMIALMALF LVLWVMQVVD KEERKAIVAH
LHSSSVFDKS YGNPFDTSQS ISPIDLAQDS SVPSKHNSNH VVSSYFRGDG DGPEIDSLIP
GNFDTQEQLA ALAKVIERMT AQINAQGNVN VTVTPQGLRI VLQDDYKQHM FSRGGAELTP
FFEDLLLALA PVFQRVNNPL IISGHTDAIP FKKRFGRQSN WALSASRADV ARNTLVEGGM
PDDRVMQVTG MSDRALLNPD EPDSSENRRI ELFVLTTPAA KVLETLFGNH QESELQKAKD
KAEFNQPVIR QEVINYSGDT ATNEVNIQEL
|
|---|
| |