| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001145 |
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| Symbol | |
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| ID | 8559458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1311678 |
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| End bp | 1313321 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646408816 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_003288295 |
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| Protein GI | 262396442 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTTC CAAAACTAAC TAAACCAAGC CTCGCCATAC TTTCTCTGAT CGGACTCAGT
GCGTGTACCA CTGTAGGACC AGATTATGTT CATCCAAAGC AGGCGCCACT GCCAAGTGAC
TGGTCGGTGC AAAAAGCAGC CAAAGATACG CAGCAATCAG AGCAACAGCT ACAACAATGG
TGGCAGCAAT TTAATGACTC AACTCTTAAT CAGCTGGTTG AGTTGGCGAG CAAACAAAAC
CTCGATTTAG AAGCCGCAGG GCTACGAATT GTACAAGCAC GTTCATTGCT TGGCATTTCG
ACGGGCTTGC AATACCCGCA AGTTCAAACC GTGTCAGGAA ACCTAGCGCG TGCCTACGTA
AATGATCAGG GCGTGAATAA CGCCACTTTG TCGTTTGATG CTGCTTGGGA AATGGATGTT
TGGGGCAAGT ATGCTCGCGG TATTGAGTCG GCAGAAGCGG GTTACTACGC ATCCATCGCA
TCGTATCACG ACATCATGGT CACCATAACC GCCGAAGTGG CGCGCAATTA CATCAACTAT
CGCACATTCC AAGAACGTAT TTTGCTGTCT CGCCGCAATA TCGAGATTCA AGAGCGTGTC
GTACGTATTA CTCAGGTGCA GTTCGACTCT GGCAACGTTA CAGAATTGGA CGTTCAACAA
GCTAAAAACC AACTCTACAC CACCAAAGCA GCGCTACCGA GCCTCGAAGT GGCGATGAAG
CAGTCGCGCA CGGCACTTGC TTTGCTGTTG GGTGTACTGC CTGAAGAAGT AGAGAAATTG
CTGCAATCGG ACGGTTTGAC ACAGCAAATT GCTGACTATG AAGCGCAGTT CAAATCGACA
GGCAGAAAAT CGGCGTTATC GGGCACCGAC GAGCGCTCCA TTGTGCCGCG CCCACCGCTG
TTGGATACCC AAGTGGACGC AAACTTAGTG ATGCGACGTC CAGATTTGCA AGTCTCTGAG
ATGCAAGCTC GCGCGCAGAG TGCGCAAATT GGCGTGGCGG AAACCGCTCT GTACCCAAGC
TTTTCGTTGT TCGGTTCTAT CGGTATCGAC AGTACGGTTC CCGATGGCAG CAGTTTCAGT
TTTAGCGATT CGCTCACCAT GGTGGTTGGC CCAACGTTCA GTTGGAACAT TTTCCAATAC
GGGCGCGTGA AAAATAACAT TCGTTTCGAA GATGCTCGCT TCCAAGAAAC ACTGACTAAC
TACAACAAAA AAGTGCTGCA AGCCGTGAAC GAAGTGACCA ATGCGATCGA AGCGTATGAC
CTGTATTTGC AGCAAAAAGA TTTACGTCTG CAATCGGTCA ACTCTTCCAT TCGTGCATTC
AACATCTCCA TGACGCAGTA CGAAAACGGC CAAATCTCTT TTGAACGTCT GCTCAACTCG
GTAGAGAAAA TGACCCTTGC AGAAGACAGC TACGCAACGA TCAAAGGCAA TGTCGCGAAC
CAAGTGATCG CGCTGTACAA AGCGTTGGGC GGCGGCTGGC AGGCACAAAC GGGGAAACCA
TTCCTTGAAG AATCCATCGC CAAGCAGATG CAAGATCGTA CCGATTGGGA CGGTTATCTG
GATGAAGAAA ACCGTACGTT GCCACCTTTG CCTATCGAAA CACCGACGGA AAACGGCGAT
AAGAACAAAA CGGAGGATCT CTAA
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| Protein sequence | MMLPKLTKPS LAILSLIGLS ACTTVGPDYV HPKQAPLPSD WSVQKAAKDT QQSEQQLQQW
WQQFNDSTLN QLVELASKQN LDLEAAGLRI VQARSLLGIS TGLQYPQVQT VSGNLARAYV
NDQGVNNATL SFDAAWEMDV WGKYARGIES AEAGYYASIA SYHDIMVTIT AEVARNYINY
RTFQERILLS RRNIEIQERV VRITQVQFDS GNVTELDVQQ AKNQLYTTKA ALPSLEVAMK
QSRTALALLL GVLPEEVEKL LQSDGLTQQI ADYEAQFKST GRKSALSGTD ERSIVPRPPL
LDTQVDANLV MRRPDLQVSE MQARAQSAQI GVAETALYPS FSLFGSIGID STVPDGSSFS
FSDSLTMVVG PTFSWNIFQY GRVKNNIRFE DARFQETLTN YNKKVLQAVN EVTNAIEAYD
LYLQQKDLRL QSVNSSIRAF NISMTQYENG QISFERLLNS VEKMTLAEDS YATIKGNVAN
QVIALYKALG GGWQAQTGKP FLEESIAKQM QDRTDWDGYL DEENRTLPPL PIETPTENGD
KNKTEDL
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