Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001141 |
Symbol | |
ID | 8559454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1308728 |
End bp | 1309876 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408812 |
Product | hypothetical protein |
Protein accession | YP_003288291 |
Protein GI | 262396438 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAC AATCGGTAAA AATCGACAGT AAGCTTTTCA TCAGTAATAT GGTGGAATCG GCAATACGCA TTGGCTTGAT CTTCGTCTTG CTGATGTTTA CGTACGACAT CATCAAACCC TTCATTCTTC CCGTTATTTG GGGTGCAATT ATAGCCGTCG CTTTAATGCC ACTTACAAAA AAGCTGGAGC GTGCATATGG CGGTCGCAGA GGCCTGGCAG CCACGACGAT TGCTTTACTT GGTATTGCAC TCTTAGTCAC ACCACTTGTT ATGGTGTCAG GTTCCATTGT GGATGGTGCA ACGCATGCGC TTGAAGTATT GCAAAACGGG CAAGTGAAGA TCCCAGGTCC AAAACCTTCC GTTGCGGATT GGCCTGTCGT AGGTGATAAG CTCTATGAGG TGTGGACCCT ATTCGCGACT AACCTTGAAC AAGCGATTCA AACCTTTATG CCGCAGATAA AGTCCGCGCT CACTTCTTTG CTCGGCACAC TTGGCGGTGT ATTGGGAAGT TTACTGCTTT CAATCTTATC ACTTGCGATT GCAGCAGGTT TTATGACGTA CTCTGAATCT GCAGCATCAG GGCTAAGAAC CATCGCTATT CGTACCGCTG GTGAAAACGC TAAAAGCTGG ACCACGCTTA TCGCAGCAAC CATTAAAAGC GTACTGCTTG GCGTAGTCGG TGTGGCGGCG ATTCAAGCGC TATTGATCGG TGCTGGTTTC TTTGTATTTG GCGTTCCGGC AGCTGGTTTG CTCACTCTGA TTCTGATGAT CTTGTGTATC GCTCAGCTAC CGGCGCTGCT TGCCGTACTA CCAGTGATTG GCTTTATGTA CATGACTCAA GATACAACGA CAGCCACCAT GTTTACTGTC TGGGTAGTAG TTGCAGCTCT TTCTGAAAAC CTGTTCAAAC CAATGTTAAT GGGACGTGGT GTCGACGTAC CAATGCCTGT GATTCTGCTC GGTGCCATCG GTGGTATGCT TTTCTACGGC ATCGTTGGTC TGTTCTTAGG TGCTGTTATC CTGGCGATTT GGTATGAGTT ATTTGTTTGG TGGTTGAGCA TTGAGAAAGC ACAACAGCAA GAAGAAATGG CAGAACAACA AGACGCTTCT GATGACCAAT CAGAGCCTGG ACACGGTGCT GGCATATAA
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Protein sequence | MDKQSVKIDS KLFISNMVES AIRIGLIFVL LMFTYDIIKP FILPVIWGAI IAVALMPLTK KLERAYGGRR GLAATTIALL GIALLVTPLV MVSGSIVDGA THALEVLQNG QVKIPGPKPS VADWPVVGDK LYEVWTLFAT NLEQAIQTFM PQIKSALTSL LGTLGGVLGS LLLSILSLAI AAGFMTYSES AASGLRTIAI RTAGENAKSW TTLIAATIKS VLLGVVGVAA IQALLIGAGF FVFGVPAAGL LTLILMILCI AQLPALLAVL PVIGFMYMTQ DTTTATMFTV WVVVAALSEN LFKPMLMGRG VDVPMPVILL GAIGGMLFYG IVGLFLGAVI LAIWYELFVW WLSIEKAQQQ EEMAEQQDAS DDQSEPGHGA GI
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