Gene VEA_001141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001141 
Symbol 
ID8559454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1308728 
End bp1309876 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content47% 
IMG OID646408812 
Producthypothetical protein 
Protein accessionYP_003288291 
Protein GI262396438 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC AATCGGTAAA AATCGACAGT AAGCTTTTCA TCAGTAATAT GGTGGAATCG 
GCAATACGCA TTGGCTTGAT CTTCGTCTTG CTGATGTTTA CGTACGACAT CATCAAACCC
TTCATTCTTC CCGTTATTTG GGGTGCAATT ATAGCCGTCG CTTTAATGCC ACTTACAAAA
AAGCTGGAGC GTGCATATGG CGGTCGCAGA GGCCTGGCAG CCACGACGAT TGCTTTACTT
GGTATTGCAC TCTTAGTCAC ACCACTTGTT ATGGTGTCAG GTTCCATTGT GGATGGTGCA
ACGCATGCGC TTGAAGTATT GCAAAACGGG CAAGTGAAGA TCCCAGGTCC AAAACCTTCC
GTTGCGGATT GGCCTGTCGT AGGTGATAAG CTCTATGAGG TGTGGACCCT ATTCGCGACT
AACCTTGAAC AAGCGATTCA AACCTTTATG CCGCAGATAA AGTCCGCGCT CACTTCTTTG
CTCGGCACAC TTGGCGGTGT ATTGGGAAGT TTACTGCTTT CAATCTTATC ACTTGCGATT
GCAGCAGGTT TTATGACGTA CTCTGAATCT GCAGCATCAG GGCTAAGAAC CATCGCTATT
CGTACCGCTG GTGAAAACGC TAAAAGCTGG ACCACGCTTA TCGCAGCAAC CATTAAAAGC
GTACTGCTTG GCGTAGTCGG TGTGGCGGCG ATTCAAGCGC TATTGATCGG TGCTGGTTTC
TTTGTATTTG GCGTTCCGGC AGCTGGTTTG CTCACTCTGA TTCTGATGAT CTTGTGTATC
GCTCAGCTAC CGGCGCTGCT TGCCGTACTA CCAGTGATTG GCTTTATGTA CATGACTCAA
GATACAACGA CAGCCACCAT GTTTACTGTC TGGGTAGTAG TTGCAGCTCT TTCTGAAAAC
CTGTTCAAAC CAATGTTAAT GGGACGTGGT GTCGACGTAC CAATGCCTGT GATTCTGCTC
GGTGCCATCG GTGGTATGCT TTTCTACGGC ATCGTTGGTC TGTTCTTAGG TGCTGTTATC
CTGGCGATTT GGTATGAGTT ATTTGTTTGG TGGTTGAGCA TTGAGAAAGC ACAACAGCAA
GAAGAAATGG CAGAACAACA AGACGCTTCT GATGACCAAT CAGAGCCTGG ACACGGTGCT
GGCATATAA
 
Protein sequence
MDKQSVKIDS KLFISNMVES AIRIGLIFVL LMFTYDIIKP FILPVIWGAI IAVALMPLTK 
KLERAYGGRR GLAATTIALL GIALLVTPLV MVSGSIVDGA THALEVLQNG QVKIPGPKPS
VADWPVVGDK LYEVWTLFAT NLEQAIQTFM PQIKSALTSL LGTLGGVLGS LLLSILSLAI
AAGFMTYSES AASGLRTIAI RTAGENAKSW TTLIAATIKS VLLGVVGVAA IQALLIGAGF
FVFGVPAAGL LTLILMILCI AQLPALLAVL PVIGFMYMTQ DTTTATMFTV WVVVAALSEN
LFKPMLMGRG VDVPMPVILL GAIGGMLFYG IVGLFLGAVI LAIWYELFVW WLSIEKAQQQ
EEMAEQQDAS DDQSEPGHGA GI