Gene VEA_001124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001124 
Symbol 
ID8559437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1289655 
End bp1291118 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content47% 
IMG OID646408795 
Productchitin binding protein 
Protein accessionYP_003288274 
Protein GI262396421 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.177583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCT TCCCAACCAA ATCCGTACTT GCATTAGCAC TTGCAAGCAT TAGCTCAAGT 
GCTGCGGCTC ACGGCTACGT ATCAGAAACC AATGATGGTG TCGCTGCAAG TCGCGCGGCA
CTATGTAAGT ATCCAACACC TGATACTAAC GAAAAAAATA ATAACTGCGG TGCCATTCAA
TACGAGCCAC AAAGTGTTGA AGGTCCTGAT GGTTTTCCAC AAACAGGGCC TCGCGATGGA
AAAATAGCAA GTGCTGAAAC CGCTCTAGCT GCCGCTCTTG ATGAACAAAC TGCCGACCGC
TGGGTTAAAC GTCCTATTCA ATCAGGTACA CAGACTTTTG AATGGACATT TACCGCTAAC
CATGTGACGC GTGACTGGAA ATATTACATC ACCAAACCTG ATTGGAACCC AAATGCCTCA
CTATCACGCG ACTCGTTTGA TCTGACTCCT TTCTGTGTAG TCGATGGCAA TATGGTTCAA
CCTCCAAAAC AGGTGAGCCA TCAATGTAAT GTGCCTACGC GCGAGGGGTA TCACGTCATT
CTGGCGGTAT GGGATGTTGG CGACACAGCG GCTTCATTTT ATAACGTGAC CGATGTGAAA
TTTGATGGCG ACAGTCCAGT CATTCCAGAT TGGACGCAAG GCGGTCAAAT TATTCCGACG
ATGGATTTAA ATGTTGGAGA TTCGGTTTAT ACGCGCGTAT TTGATCAGGC GGGTGAAAAC
ATAGCTTATC GAACCGAGCT AGAAATTACC GATGCAGTCA TGGGCAAAGC GAAAAACTGG
TCTTACGCTC TAGCAACGAA GATCAACCAA GAGCAAACTA AACTGCAAGC TGGACAGTAT
ACCGAGGATA AATTCACTCC TGTTTATGGT ACTAATCCGG TGTATCTGCA AGCTAATAGC
GGCCTTGAGC GTGTAGAAAT CGGCTACAAG ATAGAAACTC CCGCTCCAGA GTACTCACTC
ACAGTAGATG GCTTAGCAGA CGAGTATATC ATTGAGTCAA CACCGACAAC GTTGGATCTG
ACACTAACTG CTGAAGGCGA TTTAAACGCA GAACTCACCG TGTACAATCA CCACCGTGAG
CCACTTGCAA GCTGGGCAGA CGAAATGAAA GACGGCTCGG TGGAGGCTGT ATCGCTCGCT
TTAACCAAAT CAGAGCCTGG TCACCATATG CTCGTGACTC GTATTAAAGA CAAAGATGGC
AACTTGGTGG ATCAGCAAAC GCTCGACTTT CACTTAAAAG AAGAGTCAGT AACGCCACCA
CCATCTGGCG AGTACGATTT TGTCTTTCCT GAAGGGCTAT CTAGCTACAC GGCGGGCACA
AAAGTGCTTG CAAGCGACGG TGCCATTTAC CAATGTAAAC CCTTCCCATA CTCTGGTTAC
TGTGTACAGT GGAAAGAAAG CGCAAACCAA TACGAACCAG GAACAGGTTC ACACTGGGAA
ATGGCTTGGG ATAAAGTCAA CTAA
 
Protein sequence
MKSFPTKSVL ALALASISSS AAAHGYVSET NDGVAASRAA LCKYPTPDTN EKNNNCGAIQ 
YEPQSVEGPD GFPQTGPRDG KIASAETALA AALDEQTADR WVKRPIQSGT QTFEWTFTAN
HVTRDWKYYI TKPDWNPNAS LSRDSFDLTP FCVVDGNMVQ PPKQVSHQCN VPTREGYHVI
LAVWDVGDTA ASFYNVTDVK FDGDSPVIPD WTQGGQIIPT MDLNVGDSVY TRVFDQAGEN
IAYRTELEIT DAVMGKAKNW SYALATKINQ EQTKLQAGQY TEDKFTPVYG TNPVYLQANS
GLERVEIGYK IETPAPEYSL TVDGLADEYI IESTPTTLDL TLTAEGDLNA ELTVYNHHRE
PLASWADEMK DGSVEAVSLA LTKSEPGHHM LVTRIKDKDG NLVDQQTLDF HLKEESVTPP
PSGEYDFVFP EGLSSYTAGT KVLASDGAIY QCKPFPYSGY CVQWKESANQ YEPGTGSHWE
MAWDKVN