Gene VEA_001117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001117 
Symbol 
ID8559430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1281665 
End bp1283830 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content43% 
IMG OID646408788 
Producttyrosine-protein kinase wzc 
Protein accessionYP_003288267 
Protein GI262396414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0502594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC AAACTATTAA GCAATCACGT CAAGCCGACG ATGAGATCGA TTTGGGAAAG 
TTATTTGGGA TCATTCTTGA TGCCAAATGG CTCATTCTAT GTACCGTAGT CCTATTTTCA
ATTATAGGCG TCGGCGTTGC CATTCTATCA ACACCTATCT ACAAAGCTGA CGCTCTTATC
CAAATTGAAA GTAAGAGCTC CGGTGGTATT TCAGCGATGG TTGGTGATAT GGGAGAGCTG
TTTTCAGCAG AGTCATCAGC GACAACAGAA ATTGAGATCA TTAAATCTCG TATGATTTTG
GGTGGTACCG TTGATAAGTT CAACTTAACC ACGGTCGTCT CTCCGAATTA CATGCCTATC
GTCGGTAAGG GCTTAGCTCG ACTGCAAGGC GAACAAATCA GTCTGAGCGT TTCACGATTT
AATACCCCTT CTTACGCAGT TGGAATTCCT CTAACTCTCG AAGTTATTGA TTCTGAAAAA
CAGACGTTCA GACTTATAGA AGATGACAAT AACGTCATTT TAGAAGGTAA GGTTGGCGAG
CTCATTGAAA AGAACGGCTA TCAATTCTTA GCTACAGAAA TGATAGCGCA AGACGGCGCA
TCGTTTACCG TGAGTAAAGT CAGCAAGTTA GATGCAATTA ATAAACTTCA AGAAAACTTA
TCGATAAGCG AACGTGGTAA GCAAACCGGG ATTATTTCTT TAAGCTTCTC TGGTGAAGAT
CGCGCTAAGA TTCAAGCTAT CTTGAACGAC ATTAGCCAGA ACTACTTCTT GCAAAACGTT
CAAAGAAACT CAGCAGAGGC AGAGCAAAGT CTCGAGTTCT TGAAAGGCCA CCTTCCAGAC
ATCAAAACAA AACTGACCGC TTCTGAAGAC GTTTTAAATC GATTCCGTCA AGAAAATGAA
TCTATCGACT TAGGCCTTGA AGCTCAATCA ACTCTGAAAG TGATGGTTGA ATTAGAAGCG
CAGTTAAATG AGCTTACATT CAAAGAGAGT GAAATCAGCC AGCGCTTTAC ACAAGATCAC
CCGGCTTATA AGTCTCTGCT TGATAAACGT GAGACGCTAC TCAAAGAGAA AGAGCGTCTT
AATAAACAAG TTCAAAAGTT ACCGAAAACA CAGCGTGAAG TTCTACGCAT GACGCGCGAT
GTAGAAGTAA ACCAACAAAT CTACATCCAG CTATTGAACA AGGTTCAAGA GCTCAACATC
ATTAAAGCAG GAACTGTTGG CAACGTTCGA ATCTTAGATA ACGCTCAGTC GTTCTCTAAG
CCAATAAAGC CGAAAAAAGC GCTTATCGTT GTGCTAGCAA CACTGCTTGG CGGCATGGCA
GGCGTGGCTT TCGTATTAAT TCGTGCGGCA TTCCACCGAG GTGTAGAAAC ACCAGATCAA
ATTGAGCAGA TTGGTATGCC TGTTTACGCT AGCGTTCCAA AATCTATTCA ACAACTGGAA
TTTGCAAACA AGCTTAAACG AAACAAAGGC AGCAACGATG AGCTAGTCCT TCTTGCTGAA
GCTAACCCGG CCGATCTTTC CATCGAGGCC CTGCGTAGTC TTCGTACTAG CCTGCACTTT
GCGATGATGG AAGCGAAGAA CAATGTTCTT ATGATTTCAG GTCCAGCACC ATCTATCGGT
AAAACGTTTG TATCGACAAA CTTTGCAGCC GTCGCTGCAA AAACAGGTCA GAAAGTACTG
CTTATCGATG CGGATATGCG TAAAGGTTAT TTGCAGCAAT GTTTTGGTTT ACGTTGGGAT
AACGGTCTTT CTGATTATTT GAGCGGCAAG ACATCCCATA GCAATATCAT TAAATCAACA
TCCATCGACA ATCTAGATGT GGTTACTCGT GGCCAAGTAC CACCAAACCC GTCAGAGCTT
TTGATGCATC CTCGCTTTAA GAGTTTTGTT GACGAAATGT CGGCGCAGTA CGATCTTGTG
ATCATCGATA CGCCGCCTGT ACTCGCGGTT ACCGACCCAA GCATTGTTGG TGCAATCGCT
GGAACAACAC TGATGGTAGC TCGTTTTGAT CAAACGACTT TGAAGGAAAT TGAAGTCGCA
CAAGGTCGCT TTGAACAATC CGGCGTGGAA GTAAAAGGCG TAATTCTAAA CGCCGTAGAG
AAGAAAGCGT CAAACTCATA CGGATATGGT TACGGTTACT ATAACTACGC TTACAAGAGC
GAGTAA
 
Protein sequence
MTTQTIKQSR QADDEIDLGK LFGIILDAKW LILCTVVLFS IIGVGVAILS TPIYKADALI 
QIESKSSGGI SAMVGDMGEL FSAESSATTE IEIIKSRMIL GGTVDKFNLT TVVSPNYMPI
VGKGLARLQG EQISLSVSRF NTPSYAVGIP LTLEVIDSEK QTFRLIEDDN NVILEGKVGE
LIEKNGYQFL ATEMIAQDGA SFTVSKVSKL DAINKLQENL SISERGKQTG IISLSFSGED
RAKIQAILND ISQNYFLQNV QRNSAEAEQS LEFLKGHLPD IKTKLTASED VLNRFRQENE
SIDLGLEAQS TLKVMVELEA QLNELTFKES EISQRFTQDH PAYKSLLDKR ETLLKEKERL
NKQVQKLPKT QREVLRMTRD VEVNQQIYIQ LLNKVQELNI IKAGTVGNVR ILDNAQSFSK
PIKPKKALIV VLATLLGGMA GVAFVLIRAA FHRGVETPDQ IEQIGMPVYA SVPKSIQQLE
FANKLKRNKG SNDELVLLAE ANPADLSIEA LRSLRTSLHF AMMEAKNNVL MISGPAPSIG
KTFVSTNFAA VAAKTGQKVL LIDADMRKGY LQQCFGLRWD NGLSDYLSGK TSHSNIIKST
SIDNLDVVTR GQVPPNPSEL LMHPRFKSFV DEMSAQYDLV IIDTPPVLAV TDPSIVGAIA
GTTLMVARFD QTTLKEIEVA QGRFEQSGVE VKGVILNAVE KKASNSYGYG YGYYNYAYKS
E