| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001106 |
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| Symbol | |
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| ID | 8559419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1270808 |
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| End bp | 1271485 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408777 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_003288256 |
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| Protein GI | 262396403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.884985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAAAA GGCTTAAGTC ATTTCTATTT AAAATGGTGT TGATATTGCT GATCGCCCCA
GTCGTTTTGG TTGGTGTGGT GAAATATGTC GATCCGCCAA TATGGGGATG GAAGTTAAGC
CGCATTGTTG TGCCACCAAA GAACTATCCA GACAGCAGCC AACACGAATG GGTACCCTTG
TCACGTATTT CAAAAAATAT GCAGTTAGCG GTGATTGCGA CCGAAGACCA AAAATTCCCT
CATCACTATG GATTGGACTT CGAATCGCTA TTCGACGTGA TTGCCGAGGC AGGTGACAAT
GGCCCGTCGA GAGGCGCGAG CACGATTACC CAACAAGCCG CGAAAAATGT GTTTTTGTTT
CCTTCTCACT CCTACGCTCG CAAGGCTTAC GAGCTTTACT TTGCTTTGCT GATGGAGCTG
ATGTGGAGTA AAGAGCGCAT TCTCGAAGTG TATCTAAATG TGATTGAATT TGGTCCCGGT
ATTTACGGTG CAGAAGCGGC GGCGCAGAAT TATTTTGGTG TCAGTGCAAA GCAACTCTCG
AAGTGGCAAG CAGCGCGTTT AGCCGTGGTG TTGCCAAACC CATATCGAAT CAAAGTCTAC
CCACAAAGTG ATTACACTGC TCGCCGCACA AGATGGGCGA TGAACCAAAT GAGCAATCTT
GGCAGCGTGC AACTTTAA
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| Protein sequence | MLKRLKSFLF KMVLILLIAP VVLVGVVKYV DPPIWGWKLS RIVVPPKNYP DSSQHEWVPL
SRISKNMQLA VIATEDQKFP HHYGLDFESL FDVIAEAGDN GPSRGASTIT QQAAKNVFLF
PSHSYARKAY ELYFALLMEL MWSKERILEV YLNVIEFGPG IYGAEAAAQN YFGVSAKQLS
KWQAARLAVV LPNPYRIKVY PQSDYTARRT RWAMNQMSNL GSVQL
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