| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001105 |
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| Symbol | |
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| ID | 8559418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1268410 |
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| End bp | 1270656 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646408776 |
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| Product | 1,4-alpha-glucan (glycogen) branching enzyme |
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| Protein accession | YP_003288255 |
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| Protein GI | 262396402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTCAGA TTTCTGGTCT TGAAAAGGAT ATTGGCTCTA GGGAGAAAGA TTTGAAAACC
ACCAAAACCA AGAAAATAAA GAAACAACAC GAACGCGCAT ACGAACTGCT TGCTGAGGCG
GCTTACTCAG ACCCATTTTC GGCGTTGGGG CCATTCATTG ATGATGGCGA AGGATCGCTG
CGAGTGTGGA TGCCGGGCGC AAACAAGGTT GAACTGCTTG TTAATGGCGA ACCTCGCGTG
GCGCTTGAGC GTGATGGCGA CAGCGGTTTC ATCTTAAAAG AGCAACGCGA TTTACACCTG
ACCCACTACC GTTTGGCGGT CGATTGGAAT GGTGTTGAAC AAATTATTGA TGACCCGTAC
CAGTACCACA ATATTTACCA AGAGTACGAG CATCTGCATA CGCCCAAAGA CATGTATCAC
TATATGGGCG CACACTTTGT CACGCTAGAA CGTGGCGGTG AAAACATCTC CGGTGTTCGC
TTCCTTGTCT ACGCACCGCA TGCATCGGCT GTTAGCCTTG TGGGTTGCTT CAACCAATGG
GACGGTCGTC GTCACCCAAT GCAACGTTTA GATTATGGCA TTTGGGGCTT GTTCATTCCT
GGCTTAGAAG AAGGCGTTCA GTACAAATTT GAGCTCAAAG GGCCAAATGG GGAAGGGCTG
CCACACAAAC AAGACCCTTG GGGTTTTTAC TCTGAGCAGT ACCCATCGTT CGCATCCATT
ACTTACGATC ACAAGCGTTA CCAATGGCAA GATGCGAAAT GGCAAAATCG CGCAGTGACA
CAAAAGCGTG ATGAAGCGTT ATCGTTTTAT GAGCTGCATG CTGGGTCATG GAAGCGCAAC
GAGAAAGGCG ATTTCCTCAA CTACCGCGAA CTCGCGGAGC AGCTGGTGCC ATACCTTGTG
GATATGGGCT ACACCCACGT TGAGCTGATG CCTGTGTCTG AGCATCCATT CTACGGTTCA
TGGGGCTATC AACCCGTTGG CTTGTTTGCG CCAACCAGCC GTTTTGGCTC ACCTGATGAT
TTCAAATTCT TCGTGGATAC ATGTCACCAA GCTGGTATCG GTGTGGTGCT GGATTGGGTT
CCGGCGCACT TCCCATCGGA TGACCACGGT TTAGCAAACT TTGACGGCAC ACCGCTGTTC
CACGACCCGG ATCCGCGTCG CGGTTGGCAC CAAGATTGGA ACTCATACAT CTATGATTTA
GGCCGTGAGC ATGTGCGTCG CTTCCTTGTA TCGAATGCGC TGTATTGGTT TGAACAATTC
CATATTGATG GCATTCGCGT GGACGCAGTC GCATCGATGC TCTATCTCGA TTATTCACGT
AGTCACGATC AGTGGGTACC GAACGTCGAC GGTGGTAACG AAAACTACGA CGCAATCGCA
ACCTTAAAAT GGATGAACGA AGAAGTGTAC AAGCACTTCC CGAATGCGAT GACGATTGCG
GAAGAGTCAA CGGCGTTTCC GGGTGTGTCT GCGCCAACCT TTATGGGTGG GTTAGGCTTT
GGCTTCAAGT GGAATATGGG GTGGATGCAC GACAGTCTTT CATACATCAA AGAAGATCCT
GTTCACCGCA AATACCACCA CAATACCATC ACATTCCCGT TAGTTTATGC GCATAGCGAG
AACTACGTCT TGTCTCTCTC TCACGACGAG GTGGTGTACG GCAAAGGTTC TATTCACAAC
AAGATGCCGG GCGATGAATG GCAGCAAACC GCAAACCTAC GTGCATACTA CGGTTACATG
TATGGTCAAC CGGGCAAAAA GCTGAACTTC ATGGGCGCGG AAATCGGCCA AACGGCGGAG
TGGAACCACG ATGATCAGTT GCAATGGTTC TTGCTGGAAT ACGAACGTCA TCAAGGCGTT
CAAAAGCTGA TGCGCGATTT GAACCACTTG TACCGCAATG AAGCGGCGAT GCACGATCAA
GATTGTGTTC CTGCTGGTTT TGAGTGGCGT CTACAAGACG AGGCAGATGC AAGCATCCTA
GCGCACGAGC GTATCAGTAA AGAGGGTGAG CGTATTCTCA TCATCACCAA CTTTACGCCC
GTACCACACG AGCGTTTCCG TTTAGGTGTT CCAAATGCAG GTCAATACGA ACTACTGCTG
AACACGGACG ACAGCAAATA CGGCGGCAGC GATTTTAAAG TGCTGACTAG TGTGAAAACG
GAAAAAGTCG AAAGTGAATC ACTGCCTCAA TCACTTGAGC TTCGTTTGCC TCCACTTTCA
ACCGTGTTCT ACAAGCTGAA TAAATAA
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| Protein sequence | MIQISGLEKD IGSREKDLKT TKTKKIKKQH ERAYELLAEA AYSDPFSALG PFIDDGEGSL
RVWMPGANKV ELLVNGEPRV ALERDGDSGF ILKEQRDLHL THYRLAVDWN GVEQIIDDPY
QYHNIYQEYE HLHTPKDMYH YMGAHFVTLE RGGENISGVR FLVYAPHASA VSLVGCFNQW
DGRRHPMQRL DYGIWGLFIP GLEEGVQYKF ELKGPNGEGL PHKQDPWGFY SEQYPSFASI
TYDHKRYQWQ DAKWQNRAVT QKRDEALSFY ELHAGSWKRN EKGDFLNYRE LAEQLVPYLV
DMGYTHVELM PVSEHPFYGS WGYQPVGLFA PTSRFGSPDD FKFFVDTCHQ AGIGVVLDWV
PAHFPSDDHG LANFDGTPLF HDPDPRRGWH QDWNSYIYDL GREHVRRFLV SNALYWFEQF
HIDGIRVDAV ASMLYLDYSR SHDQWVPNVD GGNENYDAIA TLKWMNEEVY KHFPNAMTIA
EESTAFPGVS APTFMGGLGF GFKWNMGWMH DSLSYIKEDP VHRKYHHNTI TFPLVYAHSE
NYVLSLSHDE VVYGKGSIHN KMPGDEWQQT ANLRAYYGYM YGQPGKKLNF MGAEIGQTAE
WNHDDQLQWF LLEYERHQGV QKLMRDLNHL YRNEAAMHDQ DCVPAGFEWR LQDEADASIL
AHERISKEGE RILIITNFTP VPHERFRLGV PNAGQYELLL NTDDSKYGGS DFKVLTSVKT
EKVESESLPQ SLELRLPPLS TVFYKLNK
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