Gene VEA_001102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001102 
Symbol 
ID8559415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1259983 
End bp1262691 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content47% 
IMG OID646408773 
Producttranscriptional activator of maltose regulon MalT 
Protein accessionYP_003288252 
Protein GI262396399 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGATTC CATCTAAGCT TACTCGACCA GGACGCCTGC ACAATGCCAT CGTGCGCCCA 
CGAGTGTTGG ACTTACTACA GCAAGCGCCT TACTACAAAT TGGTTTTATT CCGCTCCCCA
GCAGGTTACG GAAAAACCAC CATGGCAGCG CAGTGGCTAT CCGATAAACC AAACGTCGGT
TGGTACAGCA TTGATGACAG CGATAACGAC GGCTTTCGCT TTGTAAATTA CCTGCTTCAA
GCATTAAACA AAGCCACCAA CTTCAGTTGC TCTAACGCAC AAAAACTGGC GGAAAAACGC
CAGATCTCTT CTCTACGTTC TTTATTCAGC GAAGTGTTCG CGGAAATGGC TGATTTTCAT
CAAGAGTGCT ATGTGGTGCT TGATGACTAT CACTTGATCA CCAACGATGA AATTCATGAA
TCCATGCGTT TCTTCTTAAA ACACATGCCA GACAACCTCA CCGTTGTGGT AACAAGTCGT
GCAGCGCCGC CTCTGGGTAC TGCAAACTTA CGTGTTCGTG ATTTAATGAT CGAAATAGGC
AACGAGATGT TGGCGTTCGA TACCGAAGAA ACGACTCGCT TCTTTAATCA GCGTATTGCC
GATGGCATCG ACGAAGACAT GGCAAACAGC CTCAGAACCT ATGTGGAAGG TTGGCCATCA
GCGATGCAGT TGATCGCGTT GCAAGCGCAA CATCAAAACC GTACATTGGC ACAAACCGTA
GAGTCGGTAT CGCAGTTCAA TCACGCGCAT TTGTGGGATT ATCTGGTCGA AGAAGTGTTT
GACCTACTCG ATCACGAAAC TCGTCATTTC TTGATGCAAG TGTCCGTGCT TGACCACTTC
AATGATGAGT TAGTGTTTGC CCTTACCCAA CGCGAAGATG CGCTTGGTTT GATCGAATCA
TTAAACCGCT ACGGCTTATT CATCTACCCA CTCGAAGGGG AGCAAAACTG GTTCCGATTC
CATAACTTAT TTGGCGAGTT TTTGTCTCAT GAGCGCCAAG CGCGTATTCC TCAGCAAGAA
AAAGATCTTC ACCGCAATGC AGCTGTTGCC TGGTTACAAC AAAAAGCACC GCACCAAGCG
ATTCACCATG CACAAAAGTC GAACGATAAA GACTTGGTGG TAGAAATTCT AAACGAATTC
GGCTGGAAGA TGTTTAACCA AGGCGAGCTC AGCACACTGG AAAGCTCAAT TAATAAGTTG
GATGCTGAGC TTCTGTTCAG CCACCCAAAA CTTACGATGC TCCGAGCTTG GTTGGCTCAA
AGTCAGCATC GTTATAACCA AGTAGGCCAC CTGCTTGAAG AAGCGGAAGA GGAGCATAAA
AAGCGTAACA TTGAGTTAGA TATTCATTAT CAAGGTCAAG CAAACGCGCT GCTTGCTCAA
GTAGCTATCA ACAGCAACCA ACCAGAGAAA GCACTCGAAT TAGCGGAGCT AGCACTTAGC
CAACTTGATA ACACAATTTA CCGTAGCCGC ATTGTGGCAA CTTCGGTTGT TGGCGAAGTT
AACCACGTGC TAGGTAAACT CGACCGCGCG TTACCGATGA TGCAACAAAC CGAGAAGCTG
GCTCGTCAGT ACCAAGTTTA CCACCAAGCG TTATGGGCGA TTTTACAACA AAGCGAGATT
TTGATTGCGC AAGGTTACGT ACAAGCCGCC TTTGAGCTGC AAGATTCCGC ATTCCGCCTG
ATTGAAGATC AGCAACTTCA ACATGTTCCT CTGCACGAGT TTTTGCTGCG TATTCGAGCG
CAAGTGCTTT GGTGCTGGAA CCGACTTGAT GAAGCAGAAG AATGTGCCTA CCGAGGTCTA
CAAATTCTCG AAAACCATTC GCCAAGTAAG CACTTACACA GCTACTCGAT GCTGGCGCGT
ATTGCGGTTG GCCGTGGCGA GCTAGACAAA GCCGGTAAAT TCATTGAGCA CATTCAACAT
TTGATGAAGC AGTCGACTTA CCACGTAGAT TGGACAGCAA ACGCTTCACT ATCGTTGATC
CTGTTTTGGC AAGCGCGCGG TAACACCGAT GCAATGCAAG AATGGCTCAA CACTGCGGTT
CGTCCTGAAT CGGCATGCAA CCACTTTTCA CAATTGCAAT GGCGTAACAT TGCACGCGCA
CACATCAACT TAGGTCAATA TACCGAAGCG CGCGCAGCAT TGGATTTCCT CCAAAGTGAA
GCTCGTCGAA CCAACCTGAT CACAGATACT AATCGCAACT TAGTGGTCGA AGCGGTGTTT
GCTGCTCGTC AAAAAGACGA AGAGCAAGCA AAAGCTTTGC TAAAAGAAGC GTTAGTGATG
ACAAACCAGA CGGGGATGGT AGGTAATTTC CTCATTGATG GCGCCACCAT TGGCGGGCTA
CTGGAGAAGT TAAGCCTCCG CCATGAGTTA GGCGATCTAG AACGTCACCG CGCTCAACAA
TTGATGAAGG ATATTTCCTC CAATCAGCGC AGCCGCTCTA TTCACTTTGA TGAAGACTTC
ATTGAGAAGC TGGTAAACCA CCCTAACGTA CCGGAACTAG TTCGCACAAG CCCACTGACT
CAACGTGAGT GGCAGGTGCT TGGTTTGATT TATTCTGGTT TCAGTAATGA GCAAATCGCG
CAAGAGCTTG ATGTGGCAGG CACCACGATT AAAACCCACA TTCGCAACTT GTACCAAAAG
CTCAATATCG CCAATCGTAA AGAGGCCATT GTGACAGCTG AAAATTTACT CCAGTTGATG
GGGTACTGA
 
Protein sequence
MWIPSKLTRP GRLHNAIVRP RVLDLLQQAP YYKLVLFRSP AGYGKTTMAA QWLSDKPNVG 
WYSIDDSDND GFRFVNYLLQ ALNKATNFSC SNAQKLAEKR QISSLRSLFS EVFAEMADFH
QECYVVLDDY HLITNDEIHE SMRFFLKHMP DNLTVVVTSR AAPPLGTANL RVRDLMIEIG
NEMLAFDTEE TTRFFNQRIA DGIDEDMANS LRTYVEGWPS AMQLIALQAQ HQNRTLAQTV
ESVSQFNHAH LWDYLVEEVF DLLDHETRHF LMQVSVLDHF NDELVFALTQ REDALGLIES
LNRYGLFIYP LEGEQNWFRF HNLFGEFLSH ERQARIPQQE KDLHRNAAVA WLQQKAPHQA
IHHAQKSNDK DLVVEILNEF GWKMFNQGEL STLESSINKL DAELLFSHPK LTMLRAWLAQ
SQHRYNQVGH LLEEAEEEHK KRNIELDIHY QGQANALLAQ VAINSNQPEK ALELAELALS
QLDNTIYRSR IVATSVVGEV NHVLGKLDRA LPMMQQTEKL ARQYQVYHQA LWAILQQSEI
LIAQGYVQAA FELQDSAFRL IEDQQLQHVP LHEFLLRIRA QVLWCWNRLD EAEECAYRGL
QILENHSPSK HLHSYSMLAR IAVGRGELDK AGKFIEHIQH LMKQSTYHVD WTANASLSLI
LFWQARGNTD AMQEWLNTAV RPESACNHFS QLQWRNIARA HINLGQYTEA RAALDFLQSE
ARRTNLITDT NRNLVVEAVF AARQKDEEQA KALLKEALVM TNQTGMVGNF LIDGATIGGL
LEKLSLRHEL GDLERHRAQQ LMKDISSNQR SRSIHFDEDF IEKLVNHPNV PELVRTSPLT
QREWQVLGLI YSGFSNEQIA QELDVAGTTI KTHIRNLYQK LNIANRKEAI VTAENLLQLM
GY