Gene VEA_001096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001096 
Symbol 
ID8559409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1253960 
End bp1255177 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content48% 
IMG OID646408767 
Productsodium/dicarboxylate symporter 
Protein accessionYP_003288246 
Protein GI262396393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACACA ACAGCCTCGT TGCCCGATTT GCTCGTGGTA ACCTCGTCGT CCAGATCCTT 
GTCGGTATTG TCTTTGGTAT TTTGCTCGCC ACAATTTCCC CAAGCCATGC CGAAAGTGCA
GGATTAATTG GTAGCCTTTT TGTTGGTGCT CTTAAAGCGA TCGCGCCAAT CCTTGTGTTT
ATTTTGGTTG CCGCTTCAAT TGCGAACCAA AAGAAAAACC AGCACACGTA CATGCGTCCA
ATCGTTGTAC TGTACCTGAT GGGTACGTTC TTCGCGGCGC TATCAGCAGT GGTTCTAAGC
TTCCTTTTCC CGACCAATTT AACGCTTGTC ACCGGCGCTG AAGGTGCAAC GCCGCCTCAA
GGTATTGCTG AAATTCTACG CACACTGTTG TTTAAACTGG TCGACAACCC AGTAAATGCA
CTAGTAGAAG CAAACTACAT TGGCATTCTT GCTTGGGGTG TGGGTCTGGG TCTTGCGCTA
CACCACGCAT CTGCAACAAC GAAAGCCGTG TTTGAAGATC TCAGCCACAG CGTGTCTCAC
ATTGTTCGCT TTATCATTCG TCTTGCACCA TTTGGTATCT TTGGTCTGGT TGCTTCAACG
TTCGCAACAA CAGGCTTTAG CGCACTAGCA AGCTACGCAC ACCTTCTGGC GGTTCTTCTT
GGCGCTATGA TGATCATCGC ACTCGTTGTA AACCCGGCGA TCGTGTTCGT TAAAACTAAG
CAAAACCCTT ACCCACTTGT ATTCCGTTGC CTACGTGAAA GTGGTGTAAC CGCGTTCTTC
ACTCGTTCAA GTGCGGCGAA TATCCCAGTA AACATGGCAC TATGTGAGAA GCTAAAACTG
GACGAAGATA CATACTCAGT ATCTATCCCA CTAGGTGCGA CCATTAACAT GGCTGGTGCT
GCAATCACTA TCACAACGCT AACGCTTGCA GCTGTGCACA CTATGGGTAT TGAAGTTGAT
CTACTGACTG CGCTACTGCT AAGTATTGTG GCTGCGGTTT CTGCATGTGG CGCATCAGGT
GTTGCAGGTG GCTCGCTACT ACTTATCCCA CTTGCGTGTG GTCTGTTTGG TATCTCAAAC
GACGTAGCAA TGCAGGTTGT AGCGGTTGGC TTCATCATCG GCGTGATTCA AGACTCTGCT
GAAACTGCAC TAAACAGTTC AACAGACGTT GTCTTCACAG CAGCAGTTTG TAAATCAGAA
CAGCAAAAAG CTCAGTAA
 
Protein sequence
MQHNSLVARF ARGNLVVQIL VGIVFGILLA TISPSHAESA GLIGSLFVGA LKAIAPILVF 
ILVAASIANQ KKNQHTYMRP IVVLYLMGTF FAALSAVVLS FLFPTNLTLV TGAEGATPPQ
GIAEILRTLL FKLVDNPVNA LVEANYIGIL AWGVGLGLAL HHASATTKAV FEDLSHSVSH
IVRFIIRLAP FGIFGLVAST FATTGFSALA SYAHLLAVLL GAMMIIALVV NPAIVFVKTK
QNPYPLVFRC LRESGVTAFF TRSSAANIPV NMALCEKLKL DEDTYSVSIP LGATINMAGA
AITITTLTLA AVHTMGIEVD LLTALLLSIV AAVSACGASG VAGGSLLLIP LACGLFGISN
DVAMQVVAVG FIIGVIQDSA ETALNSSTDV VFTAAVCKSE QQKAQ