| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001092 |
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| Symbol | |
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| ID | 8559405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1249061 |
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| End bp | 1251208 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408763 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_003288242 |
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| Protein GI | 262396389 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAG ACTTTAGCTT ATTAGCTGAA TCTTTAGATG AACAATTTAA TCGTCACTTA
CTGCCTTTAG AACAAGTTGA ATTAACCGAC GTTGGTGCAG CTATTATTAC GTCAACAGAC
ATTAAAGCGG GTCTGCACAG AATGATTTCG GAAACAGGGT ACGGAATCCC TGTTTTCTTA
GTGACCGATG AAACTCCAGT TTCGGCAGAA GATTACGTTT GGTTAACGGG GGTTATTGAT
TTAGAAAGAC AATCTATCGA TTACTACTGC CGTCAAATTA ATGAAGCCGT GACTAAATAT
GAGTGTCGTC TGCTCCCTCC TTTCTTCAAG CAATTAACGC ACTACGTTGA GATGGGTAAC
TCGGCGTTTG ACTGTCCAGG GCACCAAGGT GGTCAGTTCT TCAAAAAACA CCCTGCTGGT
AAACAATTCT ACGATTTCTT TGGCGAAAAC CTATTCCGTA GCGACTTGTG TAACGCGGAC
GTGGACTTAG GTGACTTACT GATCCACGAA GGTTCTGCAC ACCAAGCGCA AGCACACGCT
GCAAAAGTAT TTAACGCTGA CAAAACTTAC TTCGTACTCA ACGGTACTTC TGCTTCAAAC
AAAGTTGTGT GTAACGCGCT AGTAACTGAA GGCGATTTGG TATTGTTCGA CCGCAATAAC
CACAAGTCGA ATCACCACGG CGCGTTAATC CAAGCGGGTG GTATGCCAGT TTATCTAGAA
ACGGCGCGTA ACCCTTGGGG CTTCATTGGT GGTATGGATG AGCACTGTTT CGATGAAGAG
TATATTCGTG CTCAAATCGC GAAAGTATCT CCAGAGCGTG CACGAGATGA ACGTCCGTTC
CGTCTGGCCA TCATCCAGTT GGGTACTTAC GACGGTACAA TTTATAACGC TCGTTACGTC
ATGGATAAGA TTGGCCACCT TTGTGACTAC ATCTTGTTTG ACTCGGCATG GGTAGGCTAT
GAGCAGTTCA TCCCTATGAT GAAAGACTGT TCGCCACTGC TACTGGATCT GAAACCAGAA
GATGCGGGTG TGATCGTGAC TCAGTCTGTT CACAAGCAAC AAGCTGGCTT CTCTCAAACG
TCGCAAATCC ACAAAAAAGA CCGCCATATC AAAGGCCAAG CTCGTTACTG CAATCACAAA
CGCTTTAACA ACGCGTTTAT GATGCACGCA TCGACATCTC CTTTCTATGC GTTGTTTGCT
GCATTGGATG TGAACGCGAA GATCCACGAT GGTGAAGCAG GCTTACGTTT ATGGAGCGAC
GCGGTTAAGA CCGGTATCGA AGCGCGTAAA GAAATTCTCA AAAGTTGTGA GTTAATTCGT
CCGTTCATTC CAAATGAAAT TGAAGGTCAA CCTTGGGGCA GTTACGACAC TGATGTGATC
GCGACCAACA AGAAGTTCTT CATGTTCGAG CCAGATGCAA ACTGGCACAA GTTTGAAGGT
TATGGCGAAG GTCAATACTT TGTTGACCCA TGTAAATTGT TGCTAACCAC GGCAGGTATT
GCAGAAGACG GCAGCTACGC AGATTTCGGT ATTCCGGCAA CGCTATTGGC GAACTTCCTT
CGAGAAAACG GCATCATCCC TGAGAAGTGT GACTTGAACT CCATCTTGTT CCTACTCACT
CCTGCTGAAG ATATGGGTAA GATCCGTCAC CTTGTCGCGC AAATCAACCG ATTTGAAAAA
TTCATTCGTG ATGATGCACC TCTCAGTATC GTGCTACCAG GCGTCTACGA AGCGAACAAA
GAGCGCTACC GTGGTTACAC CATCCGTCAG CTATGTCAGG AAATGCATGA CATGTACAAA
GAGCTGAACG TGAAACAGCT ACAAAAAGCG ATGTTCCGCA GTGAATACTT CCCACAAATG
GTTCACAAAC CAGACGTGGC AACACGCAAA TACTTCCGCG GTGAATGCGA TTACCTACCA
CTTAAAGAGG CCGTCGGCCG CGTAGCCGCC GAAGGTGCGC TGCCTTACCC TCCAGGCATT
ATCTGTGTGA TCACTGGTGA AATCTGGACC CAACAGGTGG TGGATTACTT CTTATCTCTA
GAAGAAGGCA TCAACCGATT CCCAGGCTTC GCGCCAGAAA TTCAAGGTGT GTACCTTGAA
GATGTCGACG GTCGCACTAC CGCACATTGC TATGTCCTAA AAGATTAA
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| Protein sequence | MPEDFSLLAE SLDEQFNRHL LPLEQVELTD VGAAIITSTD IKAGLHRMIS ETGYGIPVFL
VTDETPVSAE DYVWLTGVID LERQSIDYYC RQINEAVTKY ECRLLPPFFK QLTHYVEMGN
SAFDCPGHQG GQFFKKHPAG KQFYDFFGEN LFRSDLCNAD VDLGDLLIHE GSAHQAQAHA
AKVFNADKTY FVLNGTSASN KVVCNALVTE GDLVLFDRNN HKSNHHGALI QAGGMPVYLE
TARNPWGFIG GMDEHCFDEE YIRAQIAKVS PERARDERPF RLAIIQLGTY DGTIYNARYV
MDKIGHLCDY ILFDSAWVGY EQFIPMMKDC SPLLLDLKPE DAGVIVTQSV HKQQAGFSQT
SQIHKKDRHI KGQARYCNHK RFNNAFMMHA STSPFYALFA ALDVNAKIHD GEAGLRLWSD
AVKTGIEARK EILKSCELIR PFIPNEIEGQ PWGSYDTDVI ATNKKFFMFE PDANWHKFEG
YGEGQYFVDP CKLLLTTAGI AEDGSYADFG IPATLLANFL RENGIIPEKC DLNSILFLLT
PAEDMGKIRH LVAQINRFEK FIRDDAPLSI VLPGVYEANK ERYRGYTIRQ LCQEMHDMYK
ELNVKQLQKA MFRSEYFPQM VHKPDVATRK YFRGECDYLP LKEAVGRVAA EGALPYPPGI
ICVITGEIWT QQVVDYFLSL EEGINRFPGF APEIQGVYLE DVDGRTTAHC YVLKD
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