Gene VEA_001088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001088 
Symbol 
ID8559401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1240182 
End bp1241798 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content47% 
IMG OID646408759 
Productendonuclease I 
Protein accessionYP_003288238 
Protein GI262396385 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCA TAACGAAACC CCTCTGTCTT CTTGCTGTTA TTAGCTCTCC GCTTGCATAT 
AGCCAAATTC TCAATGGTGA CTTTGAACAG TGGAATGGCA GTGCGCCTAC GCAGTGGTCA
GTGATTGACG CTGGCATCGC GGTGTCGCCA AGCAGCGAAC AAATCAAATC GGGCGGCCTG
GCTGCTCAAG TCGTCGTGAA TACAGGTACC CAAAGCAACA CTGACCTTTT GCAAACCATT
AATGTGGAGC AAGGGAAAAC CTATCCGTTT TCTGTCTCGG TTTATCACAC CGAAGGAAAT
GTAAAAGCAC GTCTGGTGGT TGATGGTTAT CACAATTACT CAGATCCGCA GCAGGTAAAC
CAGTGGCAAG AGCTGGCGCA TAACTATACT GCGAGTTCGA ACAAGACCAT CAATGTCGGG
TTGCGTTTTT ATGATGAGGC CGGGTTTGAT GGCTCAGAAG TTGTCTACGT CGATAATTTT
CAACCGACCG AGACAAGTAC ACAACCTCCT GTAGAAAGCT GTAGTGATCA TGAAGTGGTT
CTTACACTCA CGACGGACAA CTATGGCTCA GAAACTAGCT GGGAGTTGAA AAATAGCCAA
GCGCAAGTGC TTTTCTCTGG TCAGGGGTAT GAGTCGTCAA CCACTGTTGA AAAGACCATG
TGTTTAGCCG ATGGTAACTA CCAATTTACG ATTCAAGACA GCTATGGCGA CGGCATTTGC
TGTGGCAATG GTTCGGGGTC TTACGCGTTG AAGGTGGGAG ATAAGACTCT TGCTTCTGGC
GCTGAATTCT CGAAAAGCGA AACCACCGAC TTTACGTTAG GTGACTCAAC CTCAACCCCA
CCAGTGGTTG ATGGTTACTA CCAAGCGGCG TCTGGCAAGA CGGGCTACGC TCTAAAAACG
GCGCTGTTTA ACATCATCAA CAACCACACT AGCCGAGGTT ATTCTGCGGT GTGGACCTTG
GTAAAAGATG CCGATATTGA TCGTTATTAC GAAAATGATG GCTCTATTCT CGATATGTAT
TCAGAGAAAC CTGCGGGCAC TGATGCTATC AGCTTCACGA AAGTGACAGA CCAATGTGGT
CAATACAGCC AAGAAGGGGA TTGCTACAAC CGTGAACACT CGTTCCCGAA AAGCTGGTTT
GGCGGCAAAG TTGAGCCGAT GAACTCAGAT GGTCACCATT TGTTTGCGAC CGATGGCTAT
GTGAATGCGA AGCGCAGTAA CTGGCCATTT GGTGAAGTGG GCACCGCGAC GTACGTGTCT
AGTAATGGTT CTAAACTTGG TCAAGCAAGC ACTGGCCTAG GTTATTCCGG TACGGTGTTT
GAGCCGATCG ATGAGTTTAA AGGCGATTTT GCTCGTGCCT ATTTCTACAT GGCAACCCGC
TATGAAAATG TAGTAGGTAA CTGGGAAGGC AATTCAAGCA ATGCGGATGC TGTCCTTGAT
GGTTCAAGTT CAACGGTTTT TGAACCTTGG GTGTTAAACA TGCTGAAACG TTGGCACAAA
AATGATCCTG TTAGTGAAAA AGAACAAAAC CGCAATCAAC AAGTGTTTGA GTTTCAGGGC
AATCGCAATC CATTCATTGA TCACCCTGAG TTTGTTGAAC AGATTTGGGG AAACTAA
 
Protein sequence
MKSITKPLCL LAVISSPLAY SQILNGDFEQ WNGSAPTQWS VIDAGIAVSP SSEQIKSGGL 
AAQVVVNTGT QSNTDLLQTI NVEQGKTYPF SVSVYHTEGN VKARLVVDGY HNYSDPQQVN
QWQELAHNYT ASSNKTINVG LRFYDEAGFD GSEVVYVDNF QPTETSTQPP VESCSDHEVV
LTLTTDNYGS ETSWELKNSQ AQVLFSGQGY ESSTTVEKTM CLADGNYQFT IQDSYGDGIC
CGNGSGSYAL KVGDKTLASG AEFSKSETTD FTLGDSTSTP PVVDGYYQAA SGKTGYALKT
ALFNIINNHT SRGYSAVWTL VKDADIDRYY ENDGSILDMY SEKPAGTDAI SFTKVTDQCG
QYSQEGDCYN REHSFPKSWF GGKVEPMNSD GHHLFATDGY VNAKRSNWPF GEVGTATYVS
SNGSKLGQAS TGLGYSGTVF EPIDEFKGDF ARAYFYMATR YENVVGNWEG NSSNADAVLD
GSSSTVFEPW VLNMLKRWHK NDPVSEKEQN RNQQVFEFQG NRNPFIDHPE FVEQIWGN