Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001088 |
Symbol | |
ID | 8559401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1240182 |
End bp | 1241798 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408759 |
Product | endonuclease I |
Protein accession | YP_003288238 |
Protein GI | 262396385 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA TAACGAAACC CCTCTGTCTT CTTGCTGTTA TTAGCTCTCC GCTTGCATAT AGCCAAATTC TCAATGGTGA CTTTGAACAG TGGAATGGCA GTGCGCCTAC GCAGTGGTCA GTGATTGACG CTGGCATCGC GGTGTCGCCA AGCAGCGAAC AAATCAAATC GGGCGGCCTG GCTGCTCAAG TCGTCGTGAA TACAGGTACC CAAAGCAACA CTGACCTTTT GCAAACCATT AATGTGGAGC AAGGGAAAAC CTATCCGTTT TCTGTCTCGG TTTATCACAC CGAAGGAAAT GTAAAAGCAC GTCTGGTGGT TGATGGTTAT CACAATTACT CAGATCCGCA GCAGGTAAAC CAGTGGCAAG AGCTGGCGCA TAACTATACT GCGAGTTCGA ACAAGACCAT CAATGTCGGG TTGCGTTTTT ATGATGAGGC CGGGTTTGAT GGCTCAGAAG TTGTCTACGT CGATAATTTT CAACCGACCG AGACAAGTAC ACAACCTCCT GTAGAAAGCT GTAGTGATCA TGAAGTGGTT CTTACACTCA CGACGGACAA CTATGGCTCA GAAACTAGCT GGGAGTTGAA AAATAGCCAA GCGCAAGTGC TTTTCTCTGG TCAGGGGTAT GAGTCGTCAA CCACTGTTGA AAAGACCATG TGTTTAGCCG ATGGTAACTA CCAATTTACG ATTCAAGACA GCTATGGCGA CGGCATTTGC TGTGGCAATG GTTCGGGGTC TTACGCGTTG AAGGTGGGAG ATAAGACTCT TGCTTCTGGC GCTGAATTCT CGAAAAGCGA AACCACCGAC TTTACGTTAG GTGACTCAAC CTCAACCCCA CCAGTGGTTG ATGGTTACTA CCAAGCGGCG TCTGGCAAGA CGGGCTACGC TCTAAAAACG GCGCTGTTTA ACATCATCAA CAACCACACT AGCCGAGGTT ATTCTGCGGT GTGGACCTTG GTAAAAGATG CCGATATTGA TCGTTATTAC GAAAATGATG GCTCTATTCT CGATATGTAT TCAGAGAAAC CTGCGGGCAC TGATGCTATC AGCTTCACGA AAGTGACAGA CCAATGTGGT CAATACAGCC AAGAAGGGGA TTGCTACAAC CGTGAACACT CGTTCCCGAA AAGCTGGTTT GGCGGCAAAG TTGAGCCGAT GAACTCAGAT GGTCACCATT TGTTTGCGAC CGATGGCTAT GTGAATGCGA AGCGCAGTAA CTGGCCATTT GGTGAAGTGG GCACCGCGAC GTACGTGTCT AGTAATGGTT CTAAACTTGG TCAAGCAAGC ACTGGCCTAG GTTATTCCGG TACGGTGTTT GAGCCGATCG ATGAGTTTAA AGGCGATTTT GCTCGTGCCT ATTTCTACAT GGCAACCCGC TATGAAAATG TAGTAGGTAA CTGGGAAGGC AATTCAAGCA ATGCGGATGC TGTCCTTGAT GGTTCAAGTT CAACGGTTTT TGAACCTTGG GTGTTAAACA TGCTGAAACG TTGGCACAAA AATGATCCTG TTAGTGAAAA AGAACAAAAC CGCAATCAAC AAGTGTTTGA GTTTCAGGGC AATCGCAATC CATTCATTGA TCACCCTGAG TTTGTTGAAC AGATTTGGGG AAACTAA
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Protein sequence | MKSITKPLCL LAVISSPLAY SQILNGDFEQ WNGSAPTQWS VIDAGIAVSP SSEQIKSGGL AAQVVVNTGT QSNTDLLQTI NVEQGKTYPF SVSVYHTEGN VKARLVVDGY HNYSDPQQVN QWQELAHNYT ASSNKTINVG LRFYDEAGFD GSEVVYVDNF QPTETSTQPP VESCSDHEVV LTLTTDNYGS ETSWELKNSQ AQVLFSGQGY ESSTTVEKTM CLADGNYQFT IQDSYGDGIC CGNGSGSYAL KVGDKTLASG AEFSKSETTD FTLGDSTSTP PVVDGYYQAA SGKTGYALKT ALFNIINNHT SRGYSAVWTL VKDADIDRYY ENDGSILDMY SEKPAGTDAI SFTKVTDQCG QYSQEGDCYN REHSFPKSWF GGKVEPMNSD GHHLFATDGY VNAKRSNWPF GEVGTATYVS SNGSKLGQAS TGLGYSGTVF EPIDEFKGDF ARAYFYMATR YENVVGNWEG NSSNADAVLD GSSSTVFEPW VLNMLKRWHK NDPVSEKEQN RNQQVFEFQG NRNPFIDHPE FVEQIWGN
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