| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001084 |
|---|
| Symbol | |
|---|
| ID | 8559397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1235110 |
|---|
| End bp | 1236381 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646408755 |
|---|
| Product | maltoporin |
|---|
| Protein accession | YP_003288234 |
|---|
| Protein GI | 262396381 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.62709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TAAGTGCAAT TGCTGCTGCT GTGGCTGCAA CTTTAGCTGC TGGTTCTGCG
TTCGCAGTGG ATTTCCACGG TTACATGCGT GCTGGCGTTG GCGTGAACGC TGACGGTGGT
CAACAATTAA CATTCGAAAA GAACAAGATC GGTCGTCTAG GTAATGAAAG CGATATCTAC
GGCGAGATTC AACTAGGTAA AGAAGTTTAC AACAACAACG GCAAAACGTT CTACGTAGAC
TCTATGGTTG CAATGACTTC TAATGGTTCA AACGACTGGG AAAGCACTTC TGCTAACTGT
GGTTTGGATA ACGGCGAAGT GAAATGTGTT GACGATGCAC AATTCGCACT ACGTCAATTC
AACGTTCAAG CTAAAGGCCT ACTAAACTTT GCTCCAGAAG CAACACTTTG GGCTGGTAAG
CGCTACTACC AACGTCACGA CATTCATATC TCTGACTTCT ACTACTGGAA CATCTCTGGC
GCGGGCGCTG GTGTTGAAGG TATCGAAGCT GGTCCAGGTA AAGTTTCTTT CGCTTGGGTT
CGTAACGACC GTGGCGATAT CGCAGATCCA GGTAACGATG GCGGCGATAC AAACGTTAAC
ACTCTAGACG TACGTTATGC AGGTCTTCCT CTGTGGGACA ACGGTTCTCT AGAAATGGGC
TTGAACTACG CAATCCTTAA CGAAACTGAC GCTGCGCCAA ACGGCACTAA AGATGCGAAA
AACGGCGTAA TGTTCACAGC AGAATTGACT CAAGGTCTAG ACGCTGGTTT CAACAAAACA
GTGCTTCAGT ACGGTACTGA AGGCTACTCA AAAACAATGG CATTCTACGG CGACGGTAGC
TGGTACGGCG CAGAAGCTGA TAACGGTGCA TCTGGTTACC GCCTAATCAA CTGGGGTGTA
ATCGGCATGG GTGACAGCTG GGAAATGGGT CACCAGTTAG TTTACGGTGT TGGTGAAGAC
ATGTGGGCTG GCCAAGACAA GTGGGAAACA ATGTCTGTTG TAGTTCGTCC AATGTACAAA
TGGGATGACA ACCACAAAAC TATCTTCGAA GCTGGTTACG CTATCGATGA TAACGACGGC
GACGAAAACA AATACGGTAA GCTAACTGTT GCTCAAGCAT GGTCTGCTGG TTCTAGCTTC
TGGGCTCGTC CTGAAATCCG TGTTTACGCT TCTTACCTAA CGGCTGACAA AGAAGACAAC
TCTAACACAT TTGACAACGG TCGTTCAGAC GATACGTTCC AATTCGGTGT ACAAGCTGAA
GCTTGGTGGT AA
|
|---|
| Protein sequence | MKKVSAIAAA VAATLAAGSA FAVDFHGYMR AGVGVNADGG QQLTFEKNKI GRLGNESDIY
GEIQLGKEVY NNNGKTFYVD SMVAMTSNGS NDWESTSANC GLDNGEVKCV DDAQFALRQF
NVQAKGLLNF APEATLWAGK RYYQRHDIHI SDFYYWNISG AGAGVEGIEA GPGKVSFAWV
RNDRGDIADP GNDGGDTNVN TLDVRYAGLP LWDNGSLEMG LNYAILNETD AAPNGTKDAK
NGVMFTAELT QGLDAGFNKT VLQYGTEGYS KTMAFYGDGS WYGAEADNGA SGYRLINWGV
IGMGDSWEMG HQLVYGVGED MWAGQDKWET MSVVVRPMYK WDDNHKTIFE AGYAIDDNDG
DENKYGKLTV AQAWSAGSSF WARPEIRVYA SYLTADKEDN SNTFDNGRSD DTFQFGVQAE
AWW
|
|---|
| |